Single-cell RNA sequencing of human kidney

A comprehensive cellular anatomy of normal human kidney is crucial to address the cellular origins of renal disease and renal cancer. Some kidney diseases may be cell type-specific, especially renal tubular cells. To investigate the classification and transcriptomic information of the human kidney,...

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Veröffentlicht in:Scientific data 2020-01, Vol.7 (1), p.4-9, Article 4
Hauptverfasser: Liao, Jinling, Yu, Zhenyuan, Chen, Yang, Bao, Mengying, Zou, Chunlin, Zhang, Haiying, Liu, Deyun, Li, Tianyu, Zhang, Qingyun, Li, Jiaping, Cheng, Jiwen, Mo, Zengnan
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Sprache:eng
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Zusammenfassung:A comprehensive cellular anatomy of normal human kidney is crucial to address the cellular origins of renal disease and renal cancer. Some kidney diseases may be cell type-specific, especially renal tubular cells. To investigate the classification and transcriptomic information of the human kidney, we rapidly obtained a single-cell suspension of the kidney and conducted single-cell RNA sequencing (scRNA-seq). Here, we present the scRNA-seq data of 23,366 high-quality cells from the kidneys of three human donors. In this dataset, we show 10 clusters of normal human renal cells. Due to the high quality of single-cell transcriptomic information, proximal tubule (PT) cells were classified into three subtypes and collecting ducts cells into two subtypes. Collectively, our data provide a reliable reference for studies on renal cell biology and kidney disease. Measurement(s) transcriptome • RNA Technology Type(s) RNA sequencing Factor Type(s) type of kidney cell Sample Characteristic - Organism Homo sapiens Machine-accessible metadata file describing the reported data: https://doi.org/10.6084/m9.figshare.11365796
ISSN:2052-4463
2052-4463
DOI:10.1038/s41597-019-0351-8