Evolution of cd59 gene in mammals

The CD59-coding sequences were obtained from 5 mammals by PCR and BLAST, and combined with the available sequences in GenBank, the nucleotide substitution rates of mammalian cd59 were calculated. Results of synonymous and nonsynonymous substitution rates revealed that cd59 experienced negative selec...

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Veröffentlicht in:Science China. Life sciences 2007-12, Vol.50 (6), p.773-779
Hauptverfasser: Gong, YuanYing, Peng, MinSheng, Zhou, WeiPing, Zhang, YaPing
Format: Artikel
Sprache:eng
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Zusammenfassung:The CD59-coding sequences were obtained from 5 mammals by PCR and BLAST, and combined with the available sequences in GenBank, the nucleotide substitution rates of mammalian cd59 were calculated. Results of synonymous and nonsynonymous substitution rates revealed that cd59 experienced negative selection in mammals overall. Four sites experiencing positive selection were found by using "site-specific" model in PAML software. These sites were distributed on the molecular surface, of which 2 sites located in the key functional domain. Furthermore, "branch-site-specific" model detected 1 positive site in cd59a and cd59b lineages which underwent accelerated evolution caused by positive selection after gene duplication in mouse.
ISSN:1006-9305
1674-7305
1862-2798
1869-1889
DOI:10.1007/s11427-007-0095-0