Genotype x environment interaction for yield and somatic cell score with automatic and conventional milking systems

The objective of this study was to quantify genotype by environment interaction (G x E) between automatic milking systems (AMS) and conventional milking systems (CMS) for test-day milk, fat, and protein yield and for test-day somatic cell score (SCS) in The Netherlands. The G x E was studied in 2 ways: 1) between AMS farms and CMS farms in the same period and 2) within farms comparing the period before introduction of AMS with the period after introduction of AMS. For both sub-objectives, a separate data set was generated. Test-day records were used to be more flexible with respect to the introduction date of AMS. Multivariate, fixed regression, test-day sire models were used to estimate variance components.