Method and system for non-disruptive data capture in networks

A method and fiber channel switch element for capturing data in a fiber channel system is provided. The method includes, detecting a condition for enabling data capture; setting a control bit to enable data capture; and capturing data based on the set control bit. The switch element includes, a diagnostic port that can configured as a traditional communication port and/or a data capture port depending on incoming frame data. The diagnostic port filters incoming frames, which is used to enable data capture.