Systematic exploration of essential yeast gene function with temperature-sensitive mutants

Essential genes have been effectively studied using temperature-sensitive alleles in yeast. Li et al . construct a large collection of temperature-sensitive yeast mutants and show how it enables high-throughput analyses of the function of essential genes. Conditional temperature-sensitive (ts) mutat...

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Veröffentlicht in:Nature biotechnology 2011-04, Vol.29 (4), p.361-367
Hauptverfasser: Andrews, Brenda, Boone, Charles, Li, Zhijian, Vizeacoumar, Franco J, Bahr, Sondra, Li, Jingjing, Warringer, Jonas, Vizeacoumar, Frederick S, Min, Renqiang, VanderSluis, Benjamin, Bellay, Jeremy, DeVit, Michael, Fleming, James A, Stephens, Andrew, Haase, Julian, Lin, Zhen-Yuan, Baryshnikova, Anastasia, Lu, Hong, Yan, Zhun, Jin, Ke, Barker, Sarah, Datti, Alessandro, Giaever, Guri, Nislow, Corey, Bulawa, Chris, Myers, Chad L, Costanzo, Michael, Gingras, Anne-Claude, Zhang, Zhaolei, Blomberg, Anders, Bloom, Kerry
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Sprache:eng
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Zusammenfassung:Essential genes have been effectively studied using temperature-sensitive alleles in yeast. Li et al . construct a large collection of temperature-sensitive yeast mutants and show how it enables high-throughput analyses of the function of essential genes. Conditional temperature-sensitive (ts) mutations are valuable reagents for studying essential genes in the yeast Saccharomyces cerevisiae . We constructed 787 ts strains, covering 497 (∼45%) of the 1,101 essential yeast genes, with ∼30% of the genes represented by multiple alleles. All of the alleles are integrated into their native genomic locus in the S288C common reference strain and are linked to a kanMX selectable marker, allowing further genetic manipulation by synthetic genetic array (SGA)–based, high-throughput methods. We show two such manipulations: barcoding of 440 strains, which enables chemical-genetic suppression analysis, and the construction of arrays of strains carrying different fluorescent markers of subcellular structure, which enables quantitative analysis of phenotypes using high-content screening. Quantitative analysis of a GFP-tubulin marker identified roles for cohesin and condensin genes in spindle disassembly. This mutant collection should facilitate a wide range of systematic studies aimed at understanding the functions of essential genes.
ISSN:1087-0156
1546-1696
1546-1696
DOI:10.1038/nbt.1832