Simulated single molecule microscopy with SMeagol

SMeagol is a software tool to simulate highly realistic microscopy data based on spatial systems biology models, in order to facilitate development, validation and optimization of advanced analysis methods for live cell single molecule microscopy data. SMeagol runs on Matlab R2014 and later, and use...

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Veröffentlicht in:	Bioinformatics (Oxford, England) England), 2016-08, Vol.32 (15), p.2394-2395
Hauptverfasser:	Lindén, Martin, Ćurić, Vladimir, Boucharin, Alexis, Fange, David, Elf, Johan
Format:	Artikel
Sprache:	eng
Schlagworte:	Algorithms Applications Notes Biologi Biology Fysik med inriktning mot biofysik microscopy Physics with specialization in Biophysics Programming Languages simulations Single Molecule Imaging single particle tracking Software Systems Biology
Online-Zugang:	Volltext
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Beschreibung
Zusammenfassung:	SMeagol is a software tool to simulate highly realistic microscopy data based on spatial systems biology models, in order to facilitate development, validation and optimization of advanced analysis methods for live cell single molecule microscopy data. SMeagol runs on Matlab R2014 and later, and uses compiled binaries in C for reaction-diffusion simulations. Documentation, source code and binaries for Mac OS, Windows and Ubuntu Linux can be downloaded from http://smeagol.sourceforge.net johan.elf@icm.uu.se Supplementary data are available at Bioinformatics online.
ISSN:	1367-4803 1367-4811 1367-4811
DOI:	10.1093/bioinformatics/btw109