A semiflexible polymer in a gliding assay: reentrant transition, role of turnover and activity

We consider a model of an extensible semiflexible filament moving in two dimensions on a motility assay of motor proteins represented explicitly as active harmonic linkers. Their heads bind stochastically to polymer segments within a capture radius, and extend along the filament in a directed fashio...

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Veröffentlicht in:Soft matter 2021-03, Vol.17 (8), p.212-2131
Hauptverfasser: Shee, Amir, Gupta, Nisha, Chaudhuri, Abhishek, Chaudhuri, Debasish
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Sprache:eng
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Zusammenfassung:We consider a model of an extensible semiflexible filament moving in two dimensions on a motility assay of motor proteins represented explicitly as active harmonic linkers. Their heads bind stochastically to polymer segments within a capture radius, and extend along the filament in a directed fashion before detaching. Both the extension and detachment rates are load-dependent and generate an active drive on the filament. The filament undergoes a first order phase transition from the open chain to spiral conformation and shows a reentrant behavior in both the active extension and the turnover, defined as the ratio of attachment-detachment rates. Associated with the phase transition, the size and shape of the polymer change non-monotonically, and the relevant autocorrelation functions display a double-exponential decay. The corresponding correlation times show a maximum signifying the dominance of spirals. The orientational dynamics captures the rotation of spirals, and its correlation time decays with activity as a power law. An extensible semiflexible filament moving on a motility assay of motor proteins undergoes first order re-entrant phase transition from open chain to spiral as a function of the extension rate and turnover of motor proteins.
ISSN:1744-683X
1744-6848
DOI:10.1039/d0sm01181a