In vitro evolution of an l-amino acid deaminase active on l-1-naphthylalanineElectronic supplementary information (ESI) available. See DOI: 10.1039/c8cy01380b
l -Amino acid deaminase from Proteus myxofaciens (PmaLAAD) is a promising biocatalyst for enantioselective biocatalysis that can be exploited to produce optically pure d -amino acids or α-keto acids. In this study, we improved the catalytic efficiency of PmaLAAD on l -1-naphthylalanine ( l -1-Nal),...
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-Amino acid deaminase from
Proteus myxofaciens
(PmaLAAD) is a promising biocatalyst for enantioselective biocatalysis that can be exploited to produce optically pure
d
-amino acids or α-keto acids. In this study, we improved the catalytic efficiency of PmaLAAD on
l
-1-naphthylalanine (
l
-1-Nal), a synthetic amino acid of biotechnological interest. Eight evolvable positions were identified by a molecular docking and evolutionary conservation analysis. These positions were subjected to site-saturation mutagenesis, producing "smaller but smarter" libraries of variants. The best variant (F318A/V412A/V438P PmaLAAD) possesses a ∼5-fold lower
K
m
(0.17 mM) and a ∼7-fold higher catalytic efficiency (9.2 s
−1
mM
−1
) on
l
-1-Nal than the wild-type enzyme. Molecular docking analysis suggests that the substitutions increase the active site volume, allowing better binding of the bulky
l
-1-Nal substrate. Bioconversion reactions showed that the F318A/V412A/V438P PmaLAAD variant outperforms the wild-type enzyme in the deracemization of
d
,
l
-1-Nal: the complete conversion of 0.6 mM of the
l
-enantiomer was achieved in about 15 min, which is ∼7.5-fold faster than the wild-type enzyme. In addition, the F318A/V412A/V438P PmaLAAD is efficiently employed, together with the M213G
d
-amino acid oxidase variant, to produce 1-naphtylpyruvate from racemic
d
,
l
-1-Nal in one pot.
l
-Amino acid deaminase from
Proteus myxofaciens
(PmaLAAD) is a promising biocatalyst for enantioselective biocatalysis that can be exploited to produce optically pure
d
-amino acids or α-keto acids. |
---|---|
ISSN: | 2044-4753 2044-4761 |
DOI: | 10.1039/c8cy01380b |