In vitro evolution of an l-amino acid deaminase active on l-1-naphthylalanineElectronic supplementary information (ESI) available. See DOI: 10.1039/c8cy01380b

l -Amino acid deaminase from Proteus myxofaciens (PmaLAAD) is a promising biocatalyst for enantioselective biocatalysis that can be exploited to produce optically pure d -amino acids or α-keto acids. In this study, we improved the catalytic efficiency of PmaLAAD on l -1-naphthylalanine ( l -1-Nal),...

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Hauptverfasser: Melis, Roberta, Rosini, Elena, Pirillo, Valentina, Pollegioni, Loredano, Molla, Gianluca
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Sprache:eng
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Zusammenfassung:l -Amino acid deaminase from Proteus myxofaciens (PmaLAAD) is a promising biocatalyst for enantioselective biocatalysis that can be exploited to produce optically pure d -amino acids or α-keto acids. In this study, we improved the catalytic efficiency of PmaLAAD on l -1-naphthylalanine ( l -1-Nal), a synthetic amino acid of biotechnological interest. Eight evolvable positions were identified by a molecular docking and evolutionary conservation analysis. These positions were subjected to site-saturation mutagenesis, producing "smaller but smarter" libraries of variants. The best variant (F318A/V412A/V438P PmaLAAD) possesses a ∼5-fold lower K m (0.17 mM) and a ∼7-fold higher catalytic efficiency (9.2 s −1 mM −1 ) on l -1-Nal than the wild-type enzyme. Molecular docking analysis suggests that the substitutions increase the active site volume, allowing better binding of the bulky l -1-Nal substrate. Bioconversion reactions showed that the F318A/V412A/V438P PmaLAAD variant outperforms the wild-type enzyme in the deracemization of d , l -1-Nal: the complete conversion of 0.6 mM of the l -enantiomer was achieved in about 15 min, which is ∼7.5-fold faster than the wild-type enzyme. In addition, the F318A/V412A/V438P PmaLAAD is efficiently employed, together with the M213G d -amino acid oxidase variant, to produce 1-naphtylpyruvate from racemic d , l -1-Nal in one pot. l -Amino acid deaminase from Proteus myxofaciens (PmaLAAD) is a promising biocatalyst for enantioselective biocatalysis that can be exploited to produce optically pure d -amino acids or α-keto acids.
ISSN:2044-4753
2044-4761
DOI:10.1039/c8cy01380b