Genome-wide identification of cystathionine beta synthase genes in wheat and its relationship with anther male sterility under heat stress
Cystathionine beta synthase (CBS) domains containing proteins (CDCPs) plays an important role in plant development through regulation of the thioredoxin system, as well as its ability to respond to biotic and abiotic stress conditions. Despite this, no systematic study has examined the wheat CBS gen...
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Veröffentlicht in: | Frontiers in plant science 2022-12, Vol.13, p.1061472-1061472 |
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Zusammenfassung: | Cystathionine beta synthase (CBS) domains containing proteins (CDCPs) plays an important role in plant development through regulation of the thioredoxin system, as well as its ability to respond to biotic and abiotic stress conditions. Despite this, no systematic study has examined the wheat CBS gene family and its relation to high temperature-induced male sterility. In this study, 66 CBS family members were identified in the wheat genome, and their gene or protein sequences were used for subsequent analysis. The
gene family was found to be unevenly distributed on 21 chromosomes, and they were classified into four subgroups according to their gene structure and phylogeny. The results of collinearity analysis showed that there were 25 shared orthologous genes between wheat, rice and
, and one shared orthologous gene between wheat, millet and barley. The cis-regulatory elements of the
were related to JA, IAA, MYB, etc. GO and KEGG pathway analysis identified these
genes to be associated with pollination, reproduction, and signaling and cellular processes, respectively. A heatmap of wheat plants based on transcriptome data showed that
genes were expressed to a higher extent in spikelets relative to other tissues. In addition, 29 putative tae-miRNAs were identified, targeting 41
genes. Moreover, qRT-PCR validation of six
genes indicated their critical role in anther development, as five of them were expressed at lower levels in heat-stressed male sterile anthers than in Normal anthers. Together with anther phenotypes, paraffin sections, starch potassium iodide staining, and qRT-PCR data, we hypothesized that the
gene has a very important connection with the heat-stressed sterility process in wheat, and these data provide a basis for further insight into their relationship. |
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ISSN: | 1664-462X 1664-462X |
DOI: | 10.3389/fpls.2022.1061472 |