Draft genomes and descriptions of Urmitella timonensis gen. nov., sp. nov. and Marasmitruncus massiliensis gen. nov., sp. nov., isolated from severely malnourished African children using culturomics
Two strains, designated as Marseille-P2918 T and Marseille-P3646 T , were isolated from a 14-week-old Senegalese girl using culturomics: Urmitella timonensis strain Marseille-P2918 T (= CSUR P2918, = DSM 103634) and Marasmitruncus massiliensis strain Marseille-P3646 T (= CSUR P3646, = CCUG72353). Bo...
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Veröffentlicht in: | Antonie van Leeuwenhoek 2022-11, Vol.115 (11), p.1349-1361 |
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Zusammenfassung: | Two strains, designated as Marseille-P2918
T
and Marseille-P3646
T
, were isolated from a 14-week-old Senegalese girl using culturomics:
Urmitella timonensis
strain Marseille-P2918
T
(= CSUR P2918, = DSM 103634) and
Marasmitruncus massiliensis
strain Marseille-P3646
T
(= CSUR P3646, = CCUG72353). Both strains were rod-shaped, anaerobic, spore forming motile bacteria. The 16S rRNA gene sequences of strains Marseille-P2918
T
(LT598554) and Marseille-P3646
T
(LT725660) shared 93.25% and 94.34% identity with
Tissierella praeacuta
ATCC 25539
T
and
Anaerotruncus colihominis
CIP 107754
T
, their respective phylogenetically closest species with standing in nomenclature. Therefore, strain Marseille-P2918
T
is classified within the family
Tissierellaceae
and order
Tissierellales
whereas strain Marseille-P3646
T
is classified within the family
Oscillospiraceae
and order
Eubacteriales
. The genome of strain Marseille-P2918
T
had a size of 2.13 Mb with a GC content of 50.52% and includes six scaffolds and six contigs, and that of strain Marseille-P3646
T
was 3.76 Mbp long consisting of five contigs with a 50.04% GC content. The genomes of both strains presented a high percentage of genes encoding enzymes involved in genetic information and processing, suggesting a high growth rate and adaptability. These new taxa are extensively described and characterised in this paper, using the concept of taxono-genomic description. |
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ISSN: | 0003-6072 1572-9699 1572-9699 |
DOI: | 10.1007/s10482-022-01777-x |