Metagenomics of Wastewater Influent from Wastewater Treatment Facilities across Ontario in the Era of Emerging SARS-CoV-2 Variants of Concern

Metagenomics of Wastewater Influent from Wastewater Treatment Facilities across Ontario in the Era of Emerging SARS-CoV-2 Variants of Concern

We report metagenomic sequencing analyses of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA in composite wastewater influent from 10 regions in Ontario, Canada, during the transition between Delta and Omicron variants of concern. The Delta and Omicron BA.1/BA.1.1 and BA.2-defining...

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Veröffentlicht in:Microbiology resource announcements 2022-07, Vol.11 (7), p.e0036222
Hauptverfasser: Lawal, Opeyemi U, Zhang, Linkang, Parreira, Valeria R, Brown, R Stephen, Chettleburgh, Charles, Dannah, Nora, Delatolla, Robert, Gilbride, Kimberly A, Graber, Tyson E, Islam, Golam, Knockleby, James, Ma, Sean, McDougall, Hanlan, McKay, R Michael, Mloszewska, Aleksandra, Oswald, Claire, Servos, Mark, Swinwood-Sky, Megan, Ybazeta, Gustavo, Habash, Marc, Goodridge, Lawrence
Format: Artikel
Sprache:eng
Schlagworte:
Environmental Microbiology
Omics Data Sets
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Zusammenfassung:We report metagenomic sequencing analyses of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA in composite wastewater influent from 10 regions in Ontario, Canada, during the transition between Delta and Omicron variants of concern. The Delta and Omicron BA.1/BA.1.1 and BA.2-defining mutations occurring in various frequencies were reported in the consensus and subconsensus sequences of the composite samples.
ISSN:2576-098X
2576-098X
DOI:10.1128/mra.00362-22