Brauer and partition diagram models for phylogenetic trees and forests

We introduce a correspondence between phylogenetic trees and Brauer diagrams, inspired by links between binary trees and matchings described by Diaconis and Holmes (1998 , 14 600-14 602. (doi:10.1073/pnas.95.25.14600)). This correspondence gives rise to a range of semigroup structures on the set of...

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Veröffentlicht in:Proceedings of the Royal Society. A, Mathematical, physical, and engineering sciences Mathematical, physical, and engineering sciences, 2022-06, Vol.478 (2262), p.20220044
Hauptverfasser: Francis, Andrew, Jarvis, Peter D
Format: Artikel
Sprache:eng
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Zusammenfassung:We introduce a correspondence between phylogenetic trees and Brauer diagrams, inspired by links between binary trees and matchings described by Diaconis and Holmes (1998 , 14 600-14 602. (doi:10.1073/pnas.95.25.14600)). This correspondence gives rise to a range of semigroup structures on the set of phylogenetic trees, and opens the prospect of many applications. We furthermore extend the Diaconis-Holmes correspondence from binary trees to non-binary trees and to forests, showing for instance that the set of all forests is in bijection with the set of partitions of finite sets.
ISSN:1364-5021
1471-2946
DOI:10.1098/rspa.2022.0044