Atomic-resolution chemical characterization of (2x)72-kDa tryptophan synthase via four- and five-dimensional ¹H-detected solid-state NMR

NMR chemical shifts provide detailed information on the chemical properties of molecules, thereby complementing structural data from techniques like X-ray crystallography and electron microscopy. Detailed analysis of protein NMR data, however, often hinges on comprehensive, site-specific assignment...

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Veröffentlicht in:Proceedings of the National Academy of Sciences - PNAS 2022-01, Vol.119 (4), p.1-9
Hauptverfasser: Klein, Alexander, Rovó, Petra, Sakhrani, Varun V., Wang, Yangyang, Holmes, Jacob B., Liu, Viktoriia, Skowronek, Patricia, Kukuk, Laura, Vasa, Suresh K., Güntert, Peter, Mueller, Leonard J., Linser, Rasmus
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Sprache:eng
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Zusammenfassung:NMR chemical shifts provide detailed information on the chemical properties of molecules, thereby complementing structural data from techniques like X-ray crystallography and electron microscopy. Detailed analysis of protein NMR data, however, often hinges on comprehensive, site-specific assignment of backbone resonances, which becomes a bottleneck for molecular weights beyond 40 to 45 kDa. Here, we show that assignments for the (2x)72-kDa protein tryptophan synthase (665 amino acids per asymmetric unit) can be achieved via higher-dimensional, proton-detected, solid-state NMR using a single, 1-mg, uniformly labeled, microcrystalline sample. This framework grants access to atom-specific characterization of chemical properties and relaxation for the backbone and side chains, including those residues important for the catalytic turnover. Combined with first-principles calculations, the chemical shifts in the β-subunit active site suggest a connection between active-site chemistry, the electrostatic environment, and catalytically important dynamics of the portal to the β-subunit from solution.
ISSN:0027-8424
1091-6490
DOI:10.1073/pnas.2114690119