UCSC Cell Browser: visualize your single-cell data

Abstract Summary As the use of single-cell technologies has grown, so has the need for tools to explore these large, complicated datasets. The UCSC Cell Browser is a tool that allows scientists to visualize gene expression and metadata annotation distribution throughout a single-cell dataset or mult...

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Veröffentlicht in:Bioinformatics 2021-12, Vol.37 (23), p.4578-4580
Hauptverfasser: Speir, Matthew L, Bhaduri, Aparna, Markov, Nikolay S, Moreno, Pablo, Nowakowski, Tomasz J, Papatheodorou, Irene, Pollen, Alex A, Raney, Brian J, Seninge, Lucas, Kent, W James, Haeussler, Maximilian
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Sprache:eng
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Zusammenfassung:Abstract Summary As the use of single-cell technologies has grown, so has the need for tools to explore these large, complicated datasets. The UCSC Cell Browser is a tool that allows scientists to visualize gene expression and metadata annotation distribution throughout a single-cell dataset or multiple datasets. Availability and implementation We provide the UCSC Cell Browser as a free website where scientists can explore a growing collection of single-cell datasets and a freely available python package for scientists to create stable, self-contained visualizations for their own single-cell datasets. Learn more at https://cells.ucsc.edu. Supplementary information Supplementary data are available at Bioinformatics online.
ISSN:1367-4803
1460-2059
1367-4811
DOI:10.1093/bioinformatics/btab503