Criibacterium bergeronii gen. nov., sp. nov., a new member of the family Peptostreptococcaceae , isolated from human clinical samples
A rod-shaped, motile anaerobic bacterium, designated CCRI-22567 , was isolated from a vaginal sample of a woman diagnosed with bacterial vaginosis and subjected to a polyphasic taxonomic study. The novel strain was capable of growth at 30-42 °C (optimum, 42 °C), at pH 5.5-8.5 (optimum, pH 7.0-7.5) a...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2021-01, Vol.71 (3) |
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| creator | Maheux, Andrée F Boudreau, Dominique K Abed, Jehane Y Bérubé, Ève Brodeur, Stéphanie Bernard, Kathryn A Hashimi, Ameena Ducrey, Éloïse Guay, Émilie F Raymond, Frédéric Corbeil, Jacques Domingo, Marc-Christian Roy, Paul H Boissinot, Maurice Tocheva, Elitza I Omar, Rabeea F |
| description | A rod-shaped, motile anaerobic bacterium, designated CCRI-22567
, was isolated from a vaginal sample of a woman diagnosed with bacterial vaginosis and subjected to a polyphasic taxonomic study. The novel strain was capable of growth at 30-42 °C (optimum, 42 °C), at pH 5.5-8.5 (optimum, pH 7.0-7.5) and in the presence of 0-1.5 % (w/v) NaCl (optimally at 0.5 % NaCl). The phylogenetic trees based on 16S rRNA gene sequences showed that strain CCRI-22567
forms a distinct evolutionary lineage independent of other taxa in the family
. Strain CCRI-22567
exhibited 90.1 % 16S rRNA gene sequence similarity to
ACC19a
and 89.7 % to
subsp.
ATCC 43716. The three closest organisms with an available whole genome were compared to strain CCRI-22567
for genomic relatedness assessment. The genomic average nucleotide identities (OrthoANIu) obtained with
ACC19a
,
subsp.
ATCC 43715 and
ATCC 35896
were 71.8, 70.3 and 69.6 %, respectively. Strain CCRI-22567
contained C
ω9
and C
ω9
DMA as the major fatty acids. The DNA G+C content of strain CCRI-22567
based on its genome sequence was 33.8 mol%. On the basis of the phylogenetic, chemotaxonomic and other phenotypic properties, strain CCRI-22567
is considered to represent a new genus and species within the family
, for which the name
gen. nov., sp. nov., is proposed. The type strain of
is CCRI-22567
(=LMG 31278
=DSM 107614
=CCUG 72594
). |
| doi_str_mv | 10.1099/ijsem.0.004691 |
| format | Article |
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, was isolated from a vaginal sample of a woman diagnosed with bacterial vaginosis and subjected to a polyphasic taxonomic study. The novel strain was capable of growth at 30-42 °C (optimum, 42 °C), at pH 5.5-8.5 (optimum, pH 7.0-7.5) and in the presence of 0-1.5 % (w/v) NaCl (optimally at 0.5 % NaCl). The phylogenetic trees based on 16S rRNA gene sequences showed that strain CCRI-22567
forms a distinct evolutionary lineage independent of other taxa in the family
. Strain CCRI-22567
exhibited 90.1 % 16S rRNA gene sequence similarity to
ACC19a
and 89.7 % to
subsp.
ATCC 43716. The three closest organisms with an available whole genome were compared to strain CCRI-22567
for genomic relatedness assessment. The genomic average nucleotide identities (OrthoANIu) obtained with
ACC19a
,
subsp.
ATCC 43715 and
ATCC 35896
were 71.8, 70.3 and 69.6 %, respectively. Strain CCRI-22567
contained C
ω9
and C
ω9
DMA as the major fatty acids. The DNA G+C content of strain CCRI-22567
based on its genome sequence was 33.8 mol%. On the basis of the phylogenetic, chemotaxonomic and other phenotypic properties, strain CCRI-22567
is considered to represent a new genus and species within the family
, for which the name
gen. nov., sp. nov., is proposed. The type strain of
is CCRI-22567
(=LMG 31278
=DSM 107614
=CCUG 72594
).</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijsem.0.004691</identifier><identifier>PMID: 33586648</identifier><language>eng</language><publisher>England: Microbiology Society</publisher><subject>New Taxa</subject><ispartof>International journal of systematic and evolutionary microbiology, 2021-01, Vol.71 (3)</ispartof><rights>2021 The Authors 2021</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c390t-cf128a4a38d5b8863059b174598de0eff5b0dad0065f5dd931627cfefc3d89d3</citedby><cites>FETCH-LOGICAL-c390t-cf128a4a38d5b8863059b174598de0eff5b0dad0065f5dd931627cfefc3d89d3</cites><orcidid>0000-0002-3545-3304 ; 0000-0003-4708-921X ; 0000-0002-3606-4060 ; 0000-0002-9973-2740 ; 0000-0002-8083-8748 ; 0000-0002-9143-2188 ; 0000-0002-4869-8319 ; 0000-0002-2406-2447 ; 0000-0003-3526-3997 ; 0000-0001-9789-2794</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,777,781,882,3733,27905,27906</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33586648$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Maheux, Andrée F</creatorcontrib><creatorcontrib>Boudreau, Dominique K</creatorcontrib><creatorcontrib>Abed, Jehane Y</creatorcontrib><creatorcontrib>Bérubé, Ève</creatorcontrib><creatorcontrib>Brodeur, Stéphanie</creatorcontrib><creatorcontrib>Bernard, Kathryn A</creatorcontrib><creatorcontrib>Hashimi, Ameena</creatorcontrib><creatorcontrib>Ducrey, Éloïse</creatorcontrib><creatorcontrib>Guay, Émilie F</creatorcontrib><creatorcontrib>Raymond, Frédéric</creatorcontrib><creatorcontrib>Corbeil, Jacques</creatorcontrib><creatorcontrib>Domingo, Marc-Christian</creatorcontrib><creatorcontrib>Roy, Paul H</creatorcontrib><creatorcontrib>Boissinot, Maurice</creatorcontrib><creatorcontrib>Tocheva, Elitza I</creatorcontrib><creatorcontrib>Omar, Rabeea F</creatorcontrib><title>Criibacterium bergeronii gen. nov., sp. nov., a new member of the family Peptostreptococcaceae , isolated from human clinical samples</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>A rod-shaped, motile anaerobic bacterium, designated CCRI-22567
, was isolated from a vaginal sample of a woman diagnosed with bacterial vaginosis and subjected to a polyphasic taxonomic study. The novel strain was capable of growth at 30-42 °C (optimum, 42 °C), at pH 5.5-8.5 (optimum, pH 7.0-7.5) and in the presence of 0-1.5 % (w/v) NaCl (optimally at 0.5 % NaCl). The phylogenetic trees based on 16S rRNA gene sequences showed that strain CCRI-22567
forms a distinct evolutionary lineage independent of other taxa in the family
. Strain CCRI-22567
exhibited 90.1 % 16S rRNA gene sequence similarity to
ACC19a
and 89.7 % to
subsp.
ATCC 43716. The three closest organisms with an available whole genome were compared to strain CCRI-22567
for genomic relatedness assessment. The genomic average nucleotide identities (OrthoANIu) obtained with
ACC19a
,
subsp.
ATCC 43715 and
ATCC 35896
were 71.8, 70.3 and 69.6 %, respectively. Strain CCRI-22567
contained C
ω9
and C
ω9
DMA as the major fatty acids. The DNA G+C content of strain CCRI-22567
based on its genome sequence was 33.8 mol%. On the basis of the phylogenetic, chemotaxonomic and other phenotypic properties, strain CCRI-22567
is considered to represent a new genus and species within the family
, for which the name
gen. nov., sp. nov., is proposed. The type strain of
is CCRI-22567
(=LMG 31278
=DSM 107614
=CCUG 72594
).</description><subject>New Taxa</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNpVUU1v1DAQjRCIlsKVI_KRQzdM4thrX5DQii-pEhx6txx7vOvKH8FOWvUH8L9J2XYFp_c08-bNaF7TvO2g7UDKD_6mYmyhBRi47J41593A-YYBHZ6feM_Pmle13gCsBYCXzRmlTHA-iPPm9654P2ozY_FLJCOWPZacvCd7TC1J-ba9JHV6YpokvCMR4yok2ZH5gMTp6MM9-YnTnOtcHsBkY7RBjeSS-JqDntESV3IkhyXqREzwyRsdSNVxClhfNy-cDhXfPOJFc_3l8_Xu2-bqx9fvu09XG0MlzBvjul7oQVNh2SgEp8Dk2G0HJoVFQOfYCFZbAM4cs1bSjvdb49AZaoW09KL5eLSdljGiNZjmooOaio-63Kusvfq_k_xB7fOtEnTLhp6tBu8fDUr-tWCdVfTVYAg6YV6q6gchmZTrm1dpe5Sakmst6E5rOlAP0am_0SlQx-jWgXf_HneSP2VF_wD8tpjK</recordid><startdate>20210101</startdate><enddate>20210101</enddate><creator>Maheux, Andrée F</creator><creator>Boudreau, Dominique K</creator><creator>Abed, Jehane Y</creator><creator>Bérubé, Ève</creator><creator>Brodeur, Stéphanie</creator><creator>Bernard, Kathryn A</creator><creator>Hashimi, Ameena</creator><creator>Ducrey, Éloïse</creator><creator>Guay, Émilie F</creator><creator>Raymond, Frédéric</creator><creator>Corbeil, Jacques</creator><creator>Domingo, Marc-Christian</creator><creator>Roy, Paul H</creator><creator>Boissinot, Maurice</creator><creator>Tocheva, Elitza I</creator><creator>Omar, Rabeea F</creator><general>Microbiology Society</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-3545-3304</orcidid><orcidid>https://orcid.org/0000-0003-4708-921X</orcidid><orcidid>https://orcid.org/0000-0002-3606-4060</orcidid><orcidid>https://orcid.org/0000-0002-9973-2740</orcidid><orcidid>https://orcid.org/0000-0002-8083-8748</orcidid><orcidid>https://orcid.org/0000-0002-9143-2188</orcidid><orcidid>https://orcid.org/0000-0002-4869-8319</orcidid><orcidid>https://orcid.org/0000-0002-2406-2447</orcidid><orcidid>https://orcid.org/0000-0003-3526-3997</orcidid><orcidid>https://orcid.org/0000-0001-9789-2794</orcidid></search><sort><creationdate>20210101</creationdate><title>Criibacterium bergeronii gen. nov., sp. nov., a new member of the family Peptostreptococcaceae , isolated from human clinical samples</title><author>Maheux, Andrée F ; Boudreau, Dominique K ; Abed, Jehane Y ; Bérubé, Ève ; Brodeur, Stéphanie ; Bernard, Kathryn A ; Hashimi, Ameena ; Ducrey, Éloïse ; Guay, Émilie F ; Raymond, Frédéric ; Corbeil, Jacques ; Domingo, Marc-Christian ; Roy, Paul H ; Boissinot, Maurice ; Tocheva, Elitza I ; Omar, Rabeea F</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c390t-cf128a4a38d5b8863059b174598de0eff5b0dad0065f5dd931627cfefc3d89d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>New Taxa</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Maheux, Andrée F</creatorcontrib><creatorcontrib>Boudreau, Dominique K</creatorcontrib><creatorcontrib>Abed, Jehane Y</creatorcontrib><creatorcontrib>Bérubé, Ève</creatorcontrib><creatorcontrib>Brodeur, Stéphanie</creatorcontrib><creatorcontrib>Bernard, Kathryn A</creatorcontrib><creatorcontrib>Hashimi, Ameena</creatorcontrib><creatorcontrib>Ducrey, Éloïse</creatorcontrib><creatorcontrib>Guay, Émilie F</creatorcontrib><creatorcontrib>Raymond, Frédéric</creatorcontrib><creatorcontrib>Corbeil, Jacques</creatorcontrib><creatorcontrib>Domingo, Marc-Christian</creatorcontrib><creatorcontrib>Roy, Paul H</creatorcontrib><creatorcontrib>Boissinot, Maurice</creatorcontrib><creatorcontrib>Tocheva, Elitza I</creatorcontrib><creatorcontrib>Omar, Rabeea F</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Maheux, Andrée F</au><au>Boudreau, Dominique K</au><au>Abed, Jehane Y</au><au>Bérubé, Ève</au><au>Brodeur, Stéphanie</au><au>Bernard, Kathryn A</au><au>Hashimi, Ameena</au><au>Ducrey, Éloïse</au><au>Guay, Émilie F</au><au>Raymond, Frédéric</au><au>Corbeil, Jacques</au><au>Domingo, Marc-Christian</au><au>Roy, Paul H</au><au>Boissinot, Maurice</au><au>Tocheva, Elitza I</au><au>Omar, Rabeea F</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Criibacterium bergeronii gen. nov., sp. nov., a new member of the family Peptostreptococcaceae , isolated from human clinical samples</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2021-01-01</date><risdate>2021</risdate><volume>71</volume><issue>3</issue><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>A rod-shaped, motile anaerobic bacterium, designated CCRI-22567
, was isolated from a vaginal sample of a woman diagnosed with bacterial vaginosis and subjected to a polyphasic taxonomic study. The novel strain was capable of growth at 30-42 °C (optimum, 42 °C), at pH 5.5-8.5 (optimum, pH 7.0-7.5) and in the presence of 0-1.5 % (w/v) NaCl (optimally at 0.5 % NaCl). The phylogenetic trees based on 16S rRNA gene sequences showed that strain CCRI-22567
forms a distinct evolutionary lineage independent of other taxa in the family
. Strain CCRI-22567
exhibited 90.1 % 16S rRNA gene sequence similarity to
ACC19a
and 89.7 % to
subsp.
ATCC 43716. The three closest organisms with an available whole genome were compared to strain CCRI-22567
for genomic relatedness assessment. The genomic average nucleotide identities (OrthoANIu) obtained with
ACC19a
,
subsp.
ATCC 43715 and
ATCC 35896
were 71.8, 70.3 and 69.6 %, respectively. Strain CCRI-22567
contained C
ω9
and C
ω9
DMA as the major fatty acids. The DNA G+C content of strain CCRI-22567
based on its genome sequence was 33.8 mol%. On the basis of the phylogenetic, chemotaxonomic and other phenotypic properties, strain CCRI-22567
is considered to represent a new genus and species within the family
, for which the name
gen. nov., sp. nov., is proposed. The type strain of
is CCRI-22567
(=LMG 31278
=DSM 107614
=CCUG 72594
).</abstract><cop>England</cop><pub>Microbiology Society</pub><pmid>33586648</pmid><doi>10.1099/ijsem.0.004691</doi><orcidid>https://orcid.org/0000-0002-3545-3304</orcidid><orcidid>https://orcid.org/0000-0003-4708-921X</orcidid><orcidid>https://orcid.org/0000-0002-3606-4060</orcidid><orcidid>https://orcid.org/0000-0002-9973-2740</orcidid><orcidid>https://orcid.org/0000-0002-8083-8748</orcidid><orcidid>https://orcid.org/0000-0002-9143-2188</orcidid><orcidid>https://orcid.org/0000-0002-4869-8319</orcidid><orcidid>https://orcid.org/0000-0002-2406-2447</orcidid><orcidid>https://orcid.org/0000-0003-3526-3997</orcidid><orcidid>https://orcid.org/0000-0001-9789-2794</orcidid><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
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| ispartof | International journal of systematic and evolutionary microbiology, 2021-01, Vol.71 (3) |
| issn | 1466-5026 1466-5034 |
| language | eng |
| recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_8375425 |
| source | Microbiology Society; Alma/SFX Local Collection; EZB Electronic Journals Library |
| subjects | New Taxa |
| title | Criibacterium bergeronii gen. nov., sp. nov., a new member of the family Peptostreptococcaceae , isolated from human clinical samples |
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