SPUTNIK: an R package for filtering of spatially related peaks in mass spectrometry imaging data
Abstract Summary SPUTNIK is an R package consisting of a series of tools to filter mass spectrometry imaging peaks characterized by a noisy or unlikely spatial distribution. SPUTNIK can produce mass spectrometry imaging datasets characterized by a smaller but more informative set of peaks, reduce th...
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Veröffentlicht in: | Bioinformatics 2019-01, Vol.35 (1), p.178-180 |
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Format: | Artikel |
Sprache: | eng |
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Zusammenfassung: | Abstract
Summary
SPUTNIK is an R package consisting of a series of tools to filter mass spectrometry imaging peaks characterized by a noisy or unlikely spatial distribution. SPUTNIK can produce mass spectrometry imaging datasets characterized by a smaller but more informative set of peaks, reduce the complexity of subsequent multi-variate analysis and increase the interpretability of the statistical results.
Availability and implementation
SPUTNIK is freely available online from CRAN repository and at https://github.com/paoloinglese/SPUTNIK. The package is distributed under the GNU General Public License version 3 and is accompanied by example files and data.
Supplementary information
Supplementary data are available at Bioinformatics online. |
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ISSN: | 1367-4803 1460-2059 1367-4811 |
DOI: | 10.1093/bioinformatics/bty622 |