Grimon: graphical interface to visualize multi-omics networks
Abstract Summary Rapid advances in high-throughput sequencing technologies have enabled more efficient acquisition of massive amount of multi-omics data. However, interpretation of the underlying relationships across multi-omics networks has not been fully succeeded, partly due to the lack of effect...
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Veröffentlicht in: | Bioinformatics 2018-11, Vol.34 (22), p.3934-3936 |
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Zusammenfassung: | Abstract
Summary
Rapid advances in high-throughput sequencing technologies have enabled more efficient acquisition of massive amount of multi-omics data. However, interpretation of the underlying relationships across multi-omics networks has not been fully succeeded, partly due to the lack of effective methods in visualization. To aid interpretation of the results from such multi-omics data, we here present Grimon (Graphical interface to visualize multi-omics networks), an R package that visualizes high-dimensional multi-layered data sets in three-dimensional parallel coordinates. Grimon enables users to intuitively and interactively explore their analyzed data, helping their understanding of multiple inter-layer connections embedded in high-dimensional complex data.
Availability and implementation
Grimon is freely available at https://github.com/mkanai/grimon as an R package with example omics data sets.
Supplementary information
Supplementary data are available at bioinformatics online. |
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ISSN: | 1367-4803 1460-2059 1460-2059 1367-4811 |
DOI: | 10.1093/bioinformatics/bty488 |