When phylogeny and ecology meet: Modeling the occurrence of Trichoptera with environmental and phylogenetic data

Ecological studies are increasingly considering phylogenetic relationships among species. The phylogeny is used as a proxy or filter to improve statistical tests and retain evolutionary elements, such as niche conservation. We used the phylogenetic topology to improve the model for occurrence of Tri...

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Veröffentlicht in:Ecology and evolution 2018-06, Vol.8 (11), p.5313-5322
Hauptverfasser: Godoy, Bruno Spacek, Camargos, Lucas Marques, Lodi, Sara
Format: Artikel
Sprache:eng
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Zusammenfassung:Ecological studies are increasingly considering phylogenetic relationships among species. The phylogeny is used as a proxy or filter to improve statistical tests and retain evolutionary elements, such as niche conservation. We used the phylogenetic topology to improve the model for occurrence of Trichoptera genera in Cerrado (Brazilian Savanna) streams. We tested whether parameters generated by logistic models of occurrence, using phylogenetic signals, are better than models generated without phylogenetic information. We used a model with Bayesian updating to examine the influence of stream water pH and phylogenetic relationship among genera on the occurrence of Trichoptera genera. Then, we compared this model with the logistic model for each Trichoptera genus. The probability of occurrence of most genera increased with water pH, and the phylogeny‐based explicit logistic model improved the parameters estimated for observed genera. The inferred relationship between genera occurrence and stream pH improved, indicating that phylogeny adds relevant information when estimating ecological responses of organisms. Water with elevated acidity (low pH values) may be restrictive for the occurrence of Trichoptera larvae, especially if the regional streams exhibit neutral to alkaline water, as is observed in the Cerrado region. Using phylogeny‐based modeling to predict species occurrence is a prominent opportunity to extend our current statistical framework based on environmental conditions, as it enables a more precise estimation of ecological parameters. We elaborated a Bayesian updating logistic model to predict the occurrence of Trichoptera genera in Brazilian Cerrado streams using environment parameters and a phylogenetic tree for the order. The model presented in this study is very malleable allowing adjustment to model diverse relationship studies and integrating ecology and evolution.
ISSN:2045-7758
2045-7758
DOI:10.1002/ece3.4031