Genome-Wide Identification and Structural Analysis of bZIP Transcription Factor Genes in Brassica napus
The basic region/leucine zipper motif (bZIP) transcription factor family is one of the largest families of transcriptional regulators in plants. bZIP genes have been systematically characterized in some plants, but not in rapeseed ( ). In this study, we identified 247 genes in the rapeseed genome, w...
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Veröffentlicht in: | Genes 2017-10, Vol.8 (10), p.288 |
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Sprache: | eng |
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Zusammenfassung: | The basic region/leucine zipper motif (bZIP) transcription factor family is one of the largest families of transcriptional regulators in plants. bZIP genes have been systematically characterized in some plants, but not in rapeseed (
). In this study, we identified 247
genes in the rapeseed genome, which we classified into 10 subfamilies based on phylogenetic analysis of their deduced protein sequences. The
genes were grouped into functional clades with
genes with similar putative functions, indicating functional conservation. Genome mapping analysis revealed that the
are distributed unevenly across all 19 chromosomes, and that some of these genes arose through whole-genome duplication and dispersed duplication events. All expression profiles of 247 bZIP genes were extracted from RNA-sequencing data obtained from 17 different
.
ZS11 tissues with 42 various developmental stages. These genes exhibited different expression patterns in various tissues, revealing that these genes are differentially regulated. Our results provide a valuable foundation for functional dissection of the different
homologs in
.
and its parental lines and for molecular breeding studies of
genes in
.
. |
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ISSN: | 2073-4425 2073-4425 |
DOI: | 10.3390/genes8100288 |