A genome-wide approach for detecting novel insertion-deletion variants of mid-range size

A genome-wide approach for detecting novel insertion-deletion variants of mid-range size

We present SWAN, a statistical framework for robust detection of genomic structural variants in next-generation sequencing data and an analysis of mid-range size insertion and deletions (

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Veröffentlicht in:Nucleic acids research 2016-09, Vol.44 (15), p.e126-e126
Hauptverfasser: Xia, Li C, Sakshuwong, Sukolsak, Hopmans, Erik S, Bell, John M, Grimes, Susan M, Siegmund, David O, Ji, Hanlee P, Zhang, Nancy R
Format: Artikel
Sprache:eng
Schlagworte:
Adenoviridae - genetics
Algorithms
Animals
Benchmarking
Computer Simulation
Datasets as Topic
DNA Mutational Analysis - methods
Genome - genetics
Genomics - methods
INDEL Mutation - genetics
Methods Online
Pan troglodytes - virology
Poisson Distribution
Reproducibility of Results
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Beschreibung
Zusammenfassung:We present SWAN, a statistical framework for robust detection of genomic structural variants in next-generation sequencing data and an analysis of mid-range size insertion and deletions (
ISSN:0305-1048
1362-4962
DOI:10.1093/nar/gkw481