LigSearch: a knowledge-based web server to identify likely ligands for a protein target

Identifying which ligands might bind to a protein before crystallization trials could provide a significant saving in time and resources. LigSearch, a web server aimed at predicting ligands that might bind to and stabilize a given protein, has been developed. Using a protein sequence and/or structur...

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Veröffentlicht in:Acta crystallographica. Section D, Biological crystallography. Biological crystallography., 2013-12, Vol.69 (12), p.2395-2402
Hauptverfasser: de Beer, Tjaart A. P., Laskowski, Roman A., Duban, Mark-Eugene, Chan, A. W. Edith, Anderson, Wayne F., Thornton, Janet M.
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Sprache:eng
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Zusammenfassung:Identifying which ligands might bind to a protein before crystallization trials could provide a significant saving in time and resources. LigSearch, a web server aimed at predicting ligands that might bind to and stabilize a given protein, has been developed. Using a protein sequence and/or structure, the system searches against a variety of databases, combining available knowledge, and provides a clustered and ranked output of possible ligands. LigSearch can be accessed at http://www.ebi.ac.uk/thornton‐srv/databases/LigSearch.
ISSN:1399-0047
0907-4449
1399-0047
DOI:10.1107/S0907444913022294