CADLIVE optimizer: web-based parameter estimation for dynamic models

Computer simulation has been an important technique to capture the dynamics of biochemical networks. In most networks, however, few kinetic parameters have been measured in vivo because of experimental complexity. We develop a kinetic parameter estimation system, named the CADLIVE Optimizer, which c...

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Veröffentlicht in:Source code for biology and medicine 2012-08, Vol.7 (1), p.9-9, Article 9
Hauptverfasser: Inoue, Kentaro, Maeda, Kazuhiro, Kato, Yuki, Tonami, Shinpei, Takagi, Shogo, Kurata, Hiroyuki
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Sprache:eng
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Zusammenfassung:Computer simulation has been an important technique to capture the dynamics of biochemical networks. In most networks, however, few kinetic parameters have been measured in vivo because of experimental complexity. We develop a kinetic parameter estimation system, named the CADLIVE Optimizer, which comprises genetic algorithms-based solvers with a graphical user interface. This optimizer is integrated into the CADLIVE Dynamic Simulator to attain efficient simulation for dynamic models.
ISSN:1751-0473
1751-0473
DOI:10.1186/1751-0473-7-9