MetalDetector v2.0: predicting the geometry of metal binding sites from protein sequence

MetalDetector v2.0: predicting the geometry of metal binding sites from protein sequence

MetalDetector identifies CYS and HIS involved in transition metal protein binding sites, starting from sequence alone. A major new feature of release 2.0 is the ability to predict which residues are jointly involved in the coordination of the same metal ion. The server is available at http://metalde...

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Veröffentlicht in:Nucleic acids research 2011-07, Vol.39 (suppl_2), p.W288-W292
Hauptverfasser: Passerini, Andrea, Lippi, Marco, Frasconi, Paolo
Format: Artikel
Sprache:eng
Schlagworte:
Binding Sites
Cysteine - chemistry
Histidine - chemistry
Internet
Metalloproteins - chemistry
Metals - chemistry
Sequence Analysis, Protein
Software
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Zusammenfassung:MetalDetector identifies CYS and HIS involved in transition metal protein binding sites, starting from sequence alone. A major new feature of release 2.0 is the ability to predict which residues are jointly involved in the coordination of the same metal ion. The server is available at http://metaldetector.dsi.unifi.it/v2.0/.
ISSN:0305-1048
1362-4962
DOI:10.1093/nar/gkr365