Molecular signatures database (MSigDB) 3.0

Well-annotated gene sets representing the universe of the biological processes are critical for meaningful and insightful interpretation of large-scale genomic data. The Molecular Signatures Database (MSigDB) is one of the most widely used repositories of such sets. We report the availability of a n...

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Veröffentlicht in:Bioinformatics (Oxford, England) England), 2011-06, Vol.27 (12), p.1739-1740
Hauptverfasser: LIBERZON, Arthur, SUBRAMANIAN, Aravind, PINCHBACK, Reid, THORVALDSDOTTIR, Helga, TAMAYO, Pablo, MESIROV, Jill P
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Sprache:eng
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Zusammenfassung:Well-annotated gene sets representing the universe of the biological processes are critical for meaningful and insightful interpretation of large-scale genomic data. The Molecular Signatures Database (MSigDB) is one of the most widely used repositories of such sets. We report the availability of a new version of the database, MSigDB 3.0, with over 6700 gene sets, a complete revision of the collection of canonical pathways and experimental signatures from publications, enhanced annotations and upgrades to the web site. MSigDB is freely available for non-commercial use at http://www.broadinstitute.org/msigdb.
ISSN:1367-4803
1367-4811
DOI:10.1093/bioinformatics/btr260