MyHits: improvements to an interactive resource for analyzing protein sequences

The MyHits web site (http://myhits.isb-sib.ch) is an integrated service dedicated to the analysis of protein sequences. Since its first description in 2004, both the user interface and the back end of the server were improved. A number of tools (e.g. MAFFT, Jacop, Dotlet, Jalview, ESTScan) were adde...

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Veröffentlicht in:	Nucleic acids research 2007-07, Vol.35 (Web Server issue), p.W433-W437
Hauptverfasser:	Pagni, Marco, Ioannidis, Vassilios, Cerutti, Lorenzo, Zahn-Zabal, Monique, Jongeneel, C. Victor, Hau, Jörg, Martin, Olivier, Kuznetsov, Dmitri, Falquet, Laurent
Format:	Artikel
Sprache:	eng
Schlagworte:	Computational Biology - methods Computer Graphics Databases, Protein Internet Programming Languages Protein Structure, Tertiary Sequence Alignment Sequence Analysis, Protein Software Systems Integration User-Computer Interface
Online-Zugang:	Volltext
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Beschreibung
Zusammenfassung:	The MyHits web site (http://myhits.isb-sib.ch) is an integrated service dedicated to the analysis of protein sequences. Since its first description in 2004, both the user interface and the back end of the server were improved. A number of tools (e.g. MAFFT, Jacop, Dotlet, Jalview, ESTScan) were added or updated to improve the usability of the service. The MySQL schema and its associated API were revamped and the database engine (HitKeeper) was separated from the web interface. This paper summarizes the current status of the server, with an emphasis on the new services.
ISSN:	0305-1048 1362-4962
DOI:	10.1093/nar/gkm352