xGDB: open-source computational infrastructure for the integrated evaluation and analysis of genome features

The eXtensible Genome Data Broker (xGDB) provides a software infrastructure consisting of integrated tools for the storage, display, and analysis of genome features in their genomic context. Common features include gene structure annotations, spliced alignments, mapping of repetitive sequence, and m...

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Veröffentlicht in:Genome Biology (Online Edition) 2006-11, Vol.7 (11), p.R111-R111, Article R111
Hauptverfasser: Schlueter, Shannon D, Wilkerson, Matthew D, Dong, Qunfeng, Brendel, Volker
Format: Artikel
Sprache:eng
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Zusammenfassung:The eXtensible Genome Data Broker (xGDB) provides a software infrastructure consisting of integrated tools for the storage, display, and analysis of genome features in their genomic context. Common features include gene structure annotations, spliced alignments, mapping of repetitive sequence, and microarray probes, but the software supports inclusion of any property that can be associated with a genomic location. The xGDB distribution and user support utilities are available online at the xGDB project website, http://xgdb.sourceforge.net/.
ISSN:1474-760X
1465-6906
1474-760X
1465-6914
DOI:10.1186/gb-2006-7-11-r111