UniPep--a database for human N-linked glycosites: a resource for biomarker discovery

There has been considerable recent interest in proteomic analyses of plasma for the purpose of discovering biomarkers. Profiling N-linked glycopeptides is a particularly promising method because the population of N-linked glycosites represents the proteomes of plasma, the cell surface, and secreted...

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Veröffentlicht in:Genome Biology (Online Edition) 2006-08, Vol.7 (8), p.R73-1341, Article R73
Hauptverfasser: Zhang, Hui, Loriaux, Paul, Eng, Jimmy, Campbell, David, Keller, Andrew, Moss, Pat, Bonneau, Richard, Zhang, Ning, Zhou, Yong, Wollscheid, Bernd, Cooke, Kelly, Yi, Eugene C, Lee, Hookeun, Peskind, Elaine R, Zhang, Jing, Smith, Richard D, Aebersold, Ruedi
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container_end_page 1341
container_issue 8
container_start_page R73
container_title Genome Biology (Online Edition)
container_volume 7
creator Zhang, Hui
Loriaux, Paul
Eng, Jimmy
Campbell, David
Keller, Andrew
Moss, Pat
Bonneau, Richard
Zhang, Ning
Zhou, Yong
Wollscheid, Bernd
Cooke, Kelly
Yi, Eugene C
Lee, Hookeun
Peskind, Elaine R
Zhang, Jing
Smith, Richard D
Aebersold, Ruedi
description There has been considerable recent interest in proteomic analyses of plasma for the purpose of discovering biomarkers. Profiling N-linked glycopeptides is a particularly promising method because the population of N-linked glycosites represents the proteomes of plasma, the cell surface, and secreted proteins at very low redundancy and provides a compelling link between the tissue and plasma proteomes. Here, we describe UniPep http://www.unipep.org--a database of human N-linked glycosites--as a resource for biomarker discovery.
doi_str_mv 10.1186/gb-2006-7-8-r73
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subjects 60 APPLIED LIFE SCIENCES
Analysis
BASIC BIOLOGICAL SCIENCES
Biological markers
biomarkers
Blood proteins
Computational Biology - methods
Criminal investigation
Databases, Genetic
DISEASES
Genetic Markers - genetics
glycopeptides
Glycopeptides - blood
Glycopeptides - chemical synthesis
Glycopeptides - genetics
Humans
Mass Spectrometry
MASS SPECTROSCOPY
PEPTIDES
PLASMA
protein secretion
PROTEINS
proteomics
SCREENS
Software
title UniPep--a database for human N-linked glycosites: a resource for biomarker discovery
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