Oligonucleotide dendrimers: stable nano-structures

DNA dendrimers with two, three, six, nine or 27 arms were reassociated as complementary pairs in solution or with an array of complementary oligonucleotides on a solid support. In all cases, duplex stabilities were greater than those of unbranched molecules of equal length. A theoretical treatment f...

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Veröffentlicht in:Nucleic acids research 1999-08, Vol.27 (15), p.3035-3041
Hauptverfasser: Shchepinov, Mikhail S., Mir, Kalim U., Elder, John K., Frank-Kamenetskii, Maxim D., Southern, Edwin M.
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Sprache:eng
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Zusammenfassung:DNA dendrimers with two, three, six, nine or 27 arms were reassociated as complementary pairs in solution or with an array of complementary oligonucleotides on a solid support. In all cases, duplex stabilities were greater than those of unbranched molecules of equal length. A theoretical treatment for the process of dissociation of dendrimers explains the major properties of the complexes. The favourable features of DNA dendrimers—their enhanced stability and the simple predictability of their association behaviour— makes them promising as building blocks for the ‘bottom up’ approach to nano-assembly. These features also suggest applications in oligonucleotide array/DNA chip technology when higher hybridisation temperatures are required, for example, to melt secondary structure in the target.
ISSN:0305-1048
1362-4962
DOI:10.1093/nar/27.15.3035