Gapless genome assembly and epigenetic profiles reveal gene regulation of whole-genome triplication in lettuce

Abstract Background Lettuce, an important member of the Asteraceae family, is a globally cultivated cash vegetable crop. With a highly complex genome (∼2.5 Gb; 2n = 18) rich in repeat sequences, current lettuce reference genomes exhibit thousands of gaps, impeding a comprehensive understanding of th...

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Veröffentlicht in:	Gigascience 2024-01, Vol.13
Hauptverfasser:	Cao, Shuai, Sawettalake, Nunchanoke, Shen, Lisha
Format:	Artikel
Sprache:	eng
Schlagworte:	Assembly Asteraceae Callus Complexity Deoxyribonucleic acid Divergence DNA DNA Methylation Epigenesis, Genetic Epigenetics Evolutionary genetics Gene expression Gene Expression Regulation, Plant Gene regulation Gene sequencing Genes Genome, Plant Genomes Lactuca - genetics N6-methyladenosine Nucleotide sequence Plant breeding Ribonucleic acid RNA Transcription activation Transposons
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