GIL: a python package for designing custom indexing primers

Abstract Summary Generate Indexes for Libraries (GIL) is a software tool for generating primers to be used in the production of multiplexed sequencing libraries. GIL can be customized in numerous ways to meet user specifications, including length, sequencing modality, color balancing, and compatibil...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Bioinformatics (Oxford, England) England), 2023-06, Vol.39 (6)
Hauptverfasser: Mateyko, Nicholas, Tariq, Omar, Chen, Xinyi E, Cheney, Will, Salaudeen, Asfar Lathif, Luthra, Ishika, Nikpour, Najmeh, Rafi, Abdul Muntakim, Kamali Dehghan, Hadis, Jensen, Cassandra, de Boer, Carl
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
Beschreibung
Zusammenfassung:Abstract Summary Generate Indexes for Libraries (GIL) is a software tool for generating primers to be used in the production of multiplexed sequencing libraries. GIL can be customized in numerous ways to meet user specifications, including length, sequencing modality, color balancing, and compatibility with existing primers, and produces ordering and demultiplexing-ready outputs. Availability and implementation GIL is written in Python and is freely available on GitHub under the MIT license: https://github.com/de-Boer-Lab/GIL and can be accessed as a web-application implemented in Streamlit at https://dbl-gil.streamlitapp.com.
ISSN:1367-4811
1367-4803
1367-4811
DOI:10.1093/bioinformatics/btad328