Evolution and Expression of the Membrane Attack Complex and Perforin Gene Family in the Poaceae

Membrane Attack Complex and Perforin (MACPF) proteins play crucial roles in plant development and plant responses to environmental stresses. To date, only four genes have been identified in , and the functions of the gene family members in other plants, especially in important crop plants, such as t...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:International journal of molecular sciences 2020-08, Vol.21 (16), p.5736
Hauptverfasser: Yu, Lujun, Liu, Di, Chen, Shiyi, Dai, Yangshuo, Guo, Wuxiu, Zhang, Xue, Wang, Linna, Ma, Sirui, Xiao, Ming, Qi, Hua, Xiao, Shi, Chen, Qinfang
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
Beschreibung
Zusammenfassung:Membrane Attack Complex and Perforin (MACPF) proteins play crucial roles in plant development and plant responses to environmental stresses. To date, only four genes have been identified in , and the functions of the gene family members in other plants, especially in important crop plants, such as the Poaceae family, remain largely unknown. In this study, we identified and analyzed 42 genes from six completely sequenced and well annotated species representing the major Poaceae clades. A phylogenetic analysis of genes resolved four groups, characterized by shared motif organizations and gene structures within each group. genes were unevenly distributed along the Poaceae chromosomes. Moreover, segmental duplications and dispersed duplication events may have played significant roles during gene family expansion and functional diversification in the Poaceae. In addition, phylogenomic synteny analysis revealed a high degree of conservation among the Poaceae genes. In particular, Group I, II, and III genes were exposed to strong purifying selection with different evolutionary rates. Temporal and spatial expression analyses suggested that Group III genes were highly expressed relative to the other groups. In addition, most genes were highly expressed in vegetative tissues and up-regulated by several biotic and abiotic stresses. Taken together, these findings provide valuable information for further functional characterization and phenotypic validation of the Poaceae gene family.
ISSN:1422-0067
1661-6596
1422-0067
DOI:10.3390/ijms21165736