The Amsterdam Ultra-high field adult lifespan database (AHEAD): A freely available multimodal 7 Tesla submillimeter magnetic resonance imaging database
•7 Tesla submillimeter whole-brain dataset.•105 intrinsically aligned quantitative contrasts from a single scan acquisition.•Probabilistic atlases of the basal ganglia based on >1000 manual delineations.•Data freely available for further analyses. Normative databases allow testing of novel hypoth...
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| Veröffentlicht in: | NeuroImage (Orlando, Fla.) Fla.), 2020-11, Vol.221, p.117200-117200, Article 117200 |
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| creator | Alkemade, Anneke Mulder, Martijn J Groot, Josephine M Isaacs, Bethany R van Berendonk, Nikita Lute, Nicky Isherwood, Scott JS Bazin, Pierre-Louis Forstmann, Birte U |
| description | •7 Tesla submillimeter whole-brain dataset.•105 intrinsically aligned quantitative contrasts from a single scan acquisition.•Probabilistic atlases of the basal ganglia based on >1000 manual delineations.•Data freely available for further analyses.
Normative databases allow testing of novel hypotheses without the costly collection of magnetic resonance imaging (MRI) data. Here we present the Amsterdam Ultra-high field adult lifespan database (AHEAD). The AHEAD consists of 105 7 Tesla (T) whole-brain structural MRI scans tailored specifically to imaging of the human subcortex, including both male and female participants and covering the entire adult life span (18–80 yrs). We used these data to create probability maps for the subthalamic nucleus, substantia nigra, internal and external segment of the globus pallidus, and the red nucleus. Data was acquired at a submillimeter resolution using a multi-echo (ME) extension of the second gradient-echo image of the MP2RAGE sequence (MP2RAGEME) sequence, resulting in complete anatomical alignment of quantitative, R1-maps, R2*-maps, T1-maps, T1-weighted images, T2*-maps, and quantitative susceptibility mapping (QSM). Quantitative MRI maps, and derived probability maps of basal ganglia structures are freely available for further analyses. |
| doi_str_mv | 10.1016/j.neuroimage.2020.117200 |
| format | Article |
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Normative databases allow testing of novel hypotheses without the costly collection of magnetic resonance imaging (MRI) data. Here we present the Amsterdam Ultra-high field adult lifespan database (AHEAD). The AHEAD consists of 105 7 Tesla (T) whole-brain structural MRI scans tailored specifically to imaging of the human subcortex, including both male and female participants and covering the entire adult life span (18–80 yrs). We used these data to create probability maps for the subthalamic nucleus, substantia nigra, internal and external segment of the globus pallidus, and the red nucleus. Data was acquired at a submillimeter resolution using a multi-echo (ME) extension of the second gradient-echo image of the MP2RAGE sequence (MP2RAGEME) sequence, resulting in complete anatomical alignment of quantitative, R1-maps, R2*-maps, T1-maps, T1-weighted images, T2*-maps, and quantitative susceptibility mapping (QSM). Quantitative MRI maps, and derived probability maps of basal ganglia structures are freely available for further analyses.</description><identifier>ISSN: 1053-8119</identifier><identifier>EISSN: 1095-9572</identifier><identifier>DOI: 10.1016/j.neuroimage.2020.117200</identifier><identifier>PMID: 32745682</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Adolescent ; Adult ; Aged ; Aged, 80 and over ; Atlases as Topic ; Basal ganglia ; Databases, Factual ; Female ; Globus Pallidus - anatomy & histology ; Globus Pallidus - diagnostic imaging ; Humans ; Magnetic Resonance Imaging ; Male ; Middle Aged ; Neuroimaging ; Probabilistic maps ; Red Nucleus - anatomy & histology ; Red Nucleus - diagnostic imaging ; Subcortex ; Substantia Nigra - anatomy & histology ; Substantia Nigra - diagnostic imaging ; Subthalamic Nucleus - anatomy & histology ; Subthalamic Nucleus - diagnostic imaging ; Ultra-high field 7 Tesla structural MRI ; Young Adult</subject><ispartof>NeuroImage (Orlando, Fla.), 2020-11, Vol.221, p.117200-117200, Article 117200</ispartof><rights>2020 The Author(s)</rights><rights>Copyright © 2020 The Author(s). Published by Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c556t-28379d46253b4bb40e6179d791a86263015393c09cf3c1218f544a8cdfbe690c3</citedby><cites>FETCH-LOGICAL-c556t-28379d46253b4bb40e6179d791a86263015393c09cf3c1218f544a8cdfbe690c3</cites><orcidid>0000-0002-0141-5510 ; 0000-0001-7701-2462 ; 0000-0001-9640-4322 ; 0000-0002-3234-353X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.neuroimage.2020.117200$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>314,780,784,864,2102,3550,27924,27925,45995,64387</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32745682$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Alkemade, Anneke</creatorcontrib><creatorcontrib>Mulder, Martijn J</creatorcontrib><creatorcontrib>Groot, Josephine M</creatorcontrib><creatorcontrib>Isaacs, Bethany R</creatorcontrib><creatorcontrib>van Berendonk, Nikita</creatorcontrib><creatorcontrib>Lute, Nicky</creatorcontrib><creatorcontrib>Isherwood, Scott JS</creatorcontrib><creatorcontrib>Bazin, Pierre-Louis</creatorcontrib><creatorcontrib>Forstmann, Birte U</creatorcontrib><title>The Amsterdam Ultra-high field adult lifespan database (AHEAD): A freely available multimodal 7 Tesla submillimeter magnetic resonance imaging database</title><title>NeuroImage (Orlando, Fla.)</title><addtitle>Neuroimage</addtitle><description>•7 Tesla submillimeter whole-brain dataset.•105 intrinsically aligned quantitative contrasts from a single scan acquisition.•Probabilistic atlases of the basal ganglia based on >1000 manual delineations.•Data freely available for further analyses.
Normative databases allow testing of novel hypotheses without the costly collection of magnetic resonance imaging (MRI) data. Here we present the Amsterdam Ultra-high field adult lifespan database (AHEAD). The AHEAD consists of 105 7 Tesla (T) whole-brain structural MRI scans tailored specifically to imaging of the human subcortex, including both male and female participants and covering the entire adult life span (18–80 yrs). We used these data to create probability maps for the subthalamic nucleus, substantia nigra, internal and external segment of the globus pallidus, and the red nucleus. Data was acquired at a submillimeter resolution using a multi-echo (ME) extension of the second gradient-echo image of the MP2RAGE sequence (MP2RAGEME) sequence, resulting in complete anatomical alignment of quantitative, R1-maps, R2*-maps, T1-maps, T1-weighted images, T2*-maps, and quantitative susceptibility mapping (QSM). Quantitative MRI maps, and derived probability maps of basal ganglia structures are freely available for further analyses.</description><subject>Adolescent</subject><subject>Adult</subject><subject>Aged</subject><subject>Aged, 80 and over</subject><subject>Atlases as Topic</subject><subject>Basal ganglia</subject><subject>Databases, Factual</subject><subject>Female</subject><subject>Globus Pallidus - anatomy & histology</subject><subject>Globus Pallidus - diagnostic imaging</subject><subject>Humans</subject><subject>Magnetic Resonance Imaging</subject><subject>Male</subject><subject>Middle Aged</subject><subject>Neuroimaging</subject><subject>Probabilistic maps</subject><subject>Red Nucleus - anatomy & histology</subject><subject>Red Nucleus - diagnostic imaging</subject><subject>Subcortex</subject><subject>Substantia Nigra - anatomy & histology</subject><subject>Substantia Nigra - diagnostic imaging</subject><subject>Subthalamic Nucleus - anatomy & histology</subject><subject>Subthalamic Nucleus - diagnostic imaging</subject><subject>Ultra-high field 7 Tesla structural MRI</subject><subject>Young Adult</subject><issn>1053-8119</issn><issn>1095-9572</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>DOA</sourceid><recordid>eNqFUctu1DAUjRCIPuAXkJdlkcGvJA67UEpbqRKb6dq6sa9nPHKSwc5U6pf0d_GQMixZ2To6j3vvKQrC6IpRVn_ZrUY8xMkPsMEVpzzDrOGUvinOGW2rsq0a_vb4r0SpGGvPiouUdpTSlkn1vjgTvJFVrfh58bLeIumGNGO0MJDHMEcot36zJc5jsATsIcwkeIdpDyOxMEMPCclVd3fTff_8lXTERcTwTOAJfIA-IBmyxA-ThUAassYUgKRDP_gQ_IA5iOSxR5y9IRHTNMJokBxX8ePmFPCheOcgJPz4-l4Wjz9u1td35cPP2_vr7qE0VVXPJVeiaa2seSV62feSYs0y0LQMVM1rQVklWmFoa5wwjDPlKilBGet6rFtqxGVxv_jaCXZ6H_Mc8VlP4PUfYIobDTGPGlALIRQyZ1gjc1BPVdY3FKxr-popwOx1tXjt4_TrgGnWg08GQ4ARp0PSXAoqGimZylS1UE2cUoroTtGM6mPFeqf_VayPFeul4iz99JqSb4r2JPzbaSZ8WwiY7_bkMepkPOYjWx_RzHkx__-U3ySMvLw</recordid><startdate>20201101</startdate><enddate>20201101</enddate><creator>Alkemade, Anneke</creator><creator>Mulder, Martijn J</creator><creator>Groot, Josephine M</creator><creator>Isaacs, Bethany R</creator><creator>van Berendonk, Nikita</creator><creator>Lute, Nicky</creator><creator>Isherwood, Scott JS</creator><creator>Bazin, Pierre-Louis</creator><creator>Forstmann, Birte U</creator><general>Elsevier Inc</general><general>Elsevier</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-0141-5510</orcidid><orcidid>https://orcid.org/0000-0001-7701-2462</orcidid><orcidid>https://orcid.org/0000-0001-9640-4322</orcidid><orcidid>https://orcid.org/0000-0002-3234-353X</orcidid></search><sort><creationdate>20201101</creationdate><title>The Amsterdam Ultra-high field adult lifespan database (AHEAD): A freely available multimodal 7 Tesla submillimeter magnetic resonance imaging database</title><author>Alkemade, Anneke ; Mulder, Martijn J ; Groot, Josephine M ; Isaacs, Bethany R ; van Berendonk, Nikita ; Lute, Nicky ; Isherwood, Scott JS ; Bazin, Pierre-Louis ; Forstmann, Birte U</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c556t-28379d46253b4bb40e6179d791a86263015393c09cf3c1218f544a8cdfbe690c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Adolescent</topic><topic>Adult</topic><topic>Aged</topic><topic>Aged, 80 and over</topic><topic>Atlases as Topic</topic><topic>Basal ganglia</topic><topic>Databases, Factual</topic><topic>Female</topic><topic>Globus Pallidus - anatomy & histology</topic><topic>Globus Pallidus - diagnostic imaging</topic><topic>Humans</topic><topic>Magnetic Resonance Imaging</topic><topic>Male</topic><topic>Middle Aged</topic><topic>Neuroimaging</topic><topic>Probabilistic maps</topic><topic>Red Nucleus - anatomy & histology</topic><topic>Red Nucleus - diagnostic imaging</topic><topic>Subcortex</topic><topic>Substantia Nigra - anatomy & histology</topic><topic>Substantia Nigra - diagnostic imaging</topic><topic>Subthalamic Nucleus - anatomy & histology</topic><topic>Subthalamic Nucleus - diagnostic imaging</topic><topic>Ultra-high field 7 Tesla structural MRI</topic><topic>Young Adult</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Alkemade, Anneke</creatorcontrib><creatorcontrib>Mulder, Martijn J</creatorcontrib><creatorcontrib>Groot, Josephine M</creatorcontrib><creatorcontrib>Isaacs, Bethany R</creatorcontrib><creatorcontrib>van Berendonk, Nikita</creatorcontrib><creatorcontrib>Lute, Nicky</creatorcontrib><creatorcontrib>Isherwood, Scott JS</creatorcontrib><creatorcontrib>Bazin, Pierre-Louis</creatorcontrib><creatorcontrib>Forstmann, Birte U</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>NeuroImage (Orlando, Fla.)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Alkemade, Anneke</au><au>Mulder, Martijn J</au><au>Groot, Josephine M</au><au>Isaacs, Bethany R</au><au>van Berendonk, Nikita</au><au>Lute, Nicky</au><au>Isherwood, Scott JS</au><au>Bazin, Pierre-Louis</au><au>Forstmann, Birte U</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The Amsterdam Ultra-high field adult lifespan database (AHEAD): A freely available multimodal 7 Tesla submillimeter magnetic resonance imaging database</atitle><jtitle>NeuroImage (Orlando, Fla.)</jtitle><addtitle>Neuroimage</addtitle><date>2020-11-01</date><risdate>2020</risdate><volume>221</volume><spage>117200</spage><epage>117200</epage><pages>117200-117200</pages><artnum>117200</artnum><issn>1053-8119</issn><eissn>1095-9572</eissn><abstract>•7 Tesla submillimeter whole-brain dataset.•105 intrinsically aligned quantitative contrasts from a single scan acquisition.•Probabilistic atlases of the basal ganglia based on >1000 manual delineations.•Data freely available for further analyses.
Normative databases allow testing of novel hypotheses without the costly collection of magnetic resonance imaging (MRI) data. Here we present the Amsterdam Ultra-high field adult lifespan database (AHEAD). The AHEAD consists of 105 7 Tesla (T) whole-brain structural MRI scans tailored specifically to imaging of the human subcortex, including both male and female participants and covering the entire adult life span (18–80 yrs). We used these data to create probability maps for the subthalamic nucleus, substantia nigra, internal and external segment of the globus pallidus, and the red nucleus. Data was acquired at a submillimeter resolution using a multi-echo (ME) extension of the second gradient-echo image of the MP2RAGE sequence (MP2RAGEME) sequence, resulting in complete anatomical alignment of quantitative, R1-maps, R2*-maps, T1-maps, T1-weighted images, T2*-maps, and quantitative susceptibility mapping (QSM). Quantitative MRI maps, and derived probability maps of basal ganglia structures are freely available for further analyses.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>32745682</pmid><doi>10.1016/j.neuroimage.2020.117200</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0002-0141-5510</orcidid><orcidid>https://orcid.org/0000-0001-7701-2462</orcidid><orcidid>https://orcid.org/0000-0001-9640-4322</orcidid><orcidid>https://orcid.org/0000-0002-3234-353X</orcidid><oa>free_for_read</oa></addata></record> |
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| source | MEDLINE; Elsevier ScienceDirect Journals Complete; DOAJ Directory of Open Access Journals; EZB Electronic Journals Library; ProQuest Central |
| subjects | Adolescent Adult Aged Aged, 80 and over Atlases as Topic Basal ganglia Databases, Factual Female Globus Pallidus - anatomy & histology Globus Pallidus - diagnostic imaging Humans Magnetic Resonance Imaging Male Middle Aged Neuroimaging Probabilistic maps Red Nucleus - anatomy & histology Red Nucleus - diagnostic imaging Subcortex Substantia Nigra - anatomy & histology Substantia Nigra - diagnostic imaging Subthalamic Nucleus - anatomy & histology Subthalamic Nucleus - diagnostic imaging Ultra-high field 7 Tesla structural MRI Young Adult |
| title | The Amsterdam Ultra-high field adult lifespan database (AHEAD): A freely available multimodal 7 Tesla submillimeter magnetic resonance imaging database |
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