Cost-effective density functional theory (DFT) calculations of equilibrium isotopic fractionation in large organic molecules

The application of stable isotopes to address a wide range of biochemical, microbiological and environmental problems is hindered by the experimental difficulty and the computational cost of determining equilibrium isotopic fractionations (EIF) of large organic molecules. Here, we evaluate the facto...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Physical chemistry chemical physics : PCCP 2019-08, Vol.21 (32), p.17555-1757
Hauptverfasser: Iron, Mark A, Gropp, Jonathan
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
Beschreibung
Zusammenfassung:The application of stable isotopes to address a wide range of biochemical, microbiological and environmental problems is hindered by the experimental difficulty and the computational cost of determining equilibrium isotopic fractionations (EIF) of large organic molecules. Here, we evaluate the factors that impact the accuracy of computed EIFs and develop a framework for cost-effective and accurate computation of EIFs by density functional theory (DFT). We generated two benchmark databases of experimentally determined EIFs, one for H isotopes and another for the isotopes of the heavy atoms C, N and O. The accuracy of several DFT exchangecorrelation functionals in calculating EIFs was then evaluated by comparing the computational results to these experimental datasets. We find that with the def2-TZVP basis set, O3LYP had the lowest mean absolute deviation (21 and 3.9 for the isotopic fractionation of H and the heavier atoms, respectively), but the GGA/meta-GGA functionals HCTH D3BJ , HCTH and HCTH have similar performances (22 and 4.1, respectively, for HCTH D3BJ ). Leveraging the good performance of computationally efficient functionals, we provide a robust, practical, experimentally validated framework for using DFT to accurately predict EIFs of large organic molecules, including uncertainty estimates. The application of stable isotopes to large molecules is hindered by experimental and computational costs. Here, we describe a cost-effective computational framework for predicting equilibrium isotope effects and the associated uncertainties.
ISSN:1463-9076
1463-9084
DOI:10.1039/c9cp02975c