Methylation Chip Screening and Verification of Differential Genes Related to Tuberculosis Infection
To screen the genes with significant changes in DNA methylation level in active tuberculosis patients, we used the methylation chips and expanded the sample size to verify candidate genes. ① This study enrolled 9 cases of active tuberculosis patients, 3 cases of latent tuberculosis patients and 3 ca...
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Veröffentlicht in: | Sichuan da xue xue bao. Journal of Sichuan University. Yi xue ban 2017-03, Vol.48 (2), p.234 |
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Format: | Artikel |
Sprache: | chi |
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Zusammenfassung: | To screen the genes with significant changes in DNA methylation level in active tuberculosis patients, we used the methylation chips and expanded the sample size to verify candidate genes.
① This study enrolled 9 cases of active tuberculosis patients, 3 cases of latent tuberculosis patients and 3 cases of healthy controls whose age and gender were all matched. Genome DNA was extracted from peripheral blood mononuclear cell in blood samples collected from these candidates, and bisulfite conversion treatment was then conducted. After hybridization with the Illumina HD 450K Infinium Mehtylation BeadChip, the results were compared between patients group and control group, and GO and KEGG pathway analyses were performed to evaluate the function of differentially expressed genes. ② We further enrolled 60 cases of active tuberculosis patients and 60 cases of health controls (age-and gender-matched), DNA was extracted from their peripheral blood and also followed bisulfite conversion treatment. Pyrosequencing method |
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ISSN: | 1672-173X |