Genomic analysis of three Clostridioidesdifficile isolates from urban water sources

Genomic analysis of three Clostridioidesdifficile isolates from urban water sources

We investigated inflow of a wastewater treatment plant and sediment of an urban lake for the presence of Clostridioides difficile by cultivation and PCR. Among seven colonies we sequenced the complete genomes of three: two non-toxigenic isolates from wastewater and one toxigenic isolate from the urb...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Anaerobe 2019-01, Vol.56, p.22
Hauptverfasser: Numberger, Daniela, Riedel, Thomas, McEwen, Gayle, Nübel, Ulrich, Frentrup, Martinique, Schober, Isabel, Bunk, Boyke, Spröer, Cathrin, Overmann, Jörg, Grossart, Hans-Peter, Greenwood, Alex D
Format: Artikel
Sprache:eng
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
Beschreibung
Zusammenfassung:We investigated inflow of a wastewater treatment plant and sediment of an urban lake for the presence of Clostridioides difficile by cultivation and PCR. Among seven colonies we sequenced the complete genomes of three: two non-toxigenic isolates from wastewater and one toxigenic isolate from the urban lake. For all obtained isolates, a close genomic relationship with human-derived isolates was observed.
ISSN:1095-8274
DOI:10.1016/j.anaerobe.2019.01.002