The Complete Genomic Sequence of Nocardia farcinica IFM 10152

We determined the genomic sequence of Nocardia farcinica IFM 10152, a clinical isolate, and revealed the molecular basis of its versatility. The genome consists of a single circular chromosome of 6,021,225 bp with an average G+C content of 70.8% and two plasmids of 184,027 (pNF1) and 87,093 (pNF2) b...

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Veröffentlicht in:Proceedings of the National Academy of Sciences - PNAS 2004-10, Vol.101 (41), p.14925-14930
Hauptverfasser: Ishikawa, Jun, Yamashita, Atsushi, Mikami, Yuzuru, Hoshino, Yasutaka, Kurita, Haruyo, Hotta, Kunimoto, Shiba, Tadayoshi, Hattori, Masahira, Ōmura, Satoshi
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Sprache:eng
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Zusammenfassung:We determined the genomic sequence of Nocardia farcinica IFM 10152, a clinical isolate, and revealed the molecular basis of its versatility. The genome consists of a single circular chromosome of 6,021,225 bp with an average G+C content of 70.8% and two plasmids of 184,027 (pNF1) and 87,093 (pNF2) bp with average G+C contents of 67.2% and 68.4%, respectively. The chromosome encoded 5,674 putative protein-coding sequences, including many candidate genes for virulence and multidrug resistance as well as secondary metabolism. Analyses of paralogous protein families suggest that gene duplications have resulted in a bacterium that can survive not only in soil environments but also in animal tissues, resulting in disease.
ISSN:0027-8424
1091-6490
DOI:10.1073/pnas.0406410101