Human sapovirus classification based on complete capsid nucleotide sequences

The genetically diverse sapoviruses (SaVs) are a significant cause of acute human gastroenteritis. Human SaV surveillance is becoming more critical, and a better understanding of the diversity and distribution of the viral genotypes is needed. In this study, we analyzed 106 complete human SaV capsid...

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Veröffentlicht in:Archives of virology 2012-02, Vol.157 (2), p.349-352
Hauptverfasser: Oka, Tomoichiro, Mori, Kohji, Iritani, Nobuhiro, Harada, Seiya, Ueki, You, Iizuka, Setsuko, Mise, Keiji, Murakami, Kosuke, Wakita, Takaji, Katayama, Kazuhiko
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Sprache:eng
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Zusammenfassung:The genetically diverse sapoviruses (SaVs) are a significant cause of acute human gastroenteritis. Human SaV surveillance is becoming more critical, and a better understanding of the diversity and distribution of the viral genotypes is needed. In this study, we analyzed 106 complete human SaV capsid nucleotide sequences to provide a better understanding of their diversity. Based on those results, we propose a novel standardized classification scheme that meets the requirements of the International Calicivirus Scientific Committee. We believe the classification scheme and strains described here will be of value for the molecular characterization and classification of newly detected SaV genotypes and for comparing data worldwide.
ISSN:0304-8608
1432-8798
DOI:10.1007/s00705-011-1161-2