Complete genome constellation of a caprine group A rotavirus strain reveals common evolution with ruminant and human rotavirus strains

This study reports the first complete genome sequence of a caprine group A rotavirus (GAR) strain, GO34. The VP7-VP4-VP6-VP1-VP2-VP3-NSP1-NSP2-NSP3-NSP4-NSP5 genes of strain GO34, detected in Bangladesh, were assigned to the G6-P[1]-I2-R2-C2-M2-A11-N2-T6-E2-H3 genotypes, respectively. Strain GO34 wa...

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Veröffentlicht in:	Journal of general virology 2010-09, Vol.91 (Pt 9), p.2367-2373
Hauptverfasser:	Ghosh, Souvik, Alam, Mohammed Mahbub, Ahmed, Muzahed Uddin, Talukdar, Rafiqul Islam, Paul, Shyamal Kumar, Kobayashi, Nobumichi
Format:	Artikel
Sprache:	eng
Schlagworte:	Animals Bangladesh Cattle Evolution, Molecular Genome, Viral Goat Diseases - virology Goats - virology Group a rotavirus Human rotavirus Humans Phylogeny Rotavirus - classification Rotavirus - genetics Rotavirus - isolation & purification Rotavirus Infections - veterinary Rotavirus Infections - virology Ruminantia Ruminants - virology Species Specificity Viral Nonstructural Proteins - genetics Viral Structural Proteins - genetics
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Zusammenfassung:	This study reports the first complete genome sequence of a caprine group A rotavirus (GAR) strain, GO34. The VP7-VP4-VP6-VP1-VP2-VP3-NSP1-NSP2-NSP3-NSP4-NSP5 genes of strain GO34, detected in Bangladesh, were assigned to the G6-P[1]-I2-R2-C2-M2-A11-N2-T6-E2-H3 genotypes, respectively. Strain GO34 was closely related to the VP4, VP6-7 and NSP4-5 genes of bovine GARs and the NSP1 gene of GO34 to an ovine GAR. Strain GO34 shared low nucleotide sequence identities (
ISSN:	0022-1317 1465-2099 1465-2099
DOI:	10.1099/vir.0.022244-0