TRAMP: a software package for generating transposon maps

TRAMP is a software package for generating transposon maps that are used for DNA sequencing. The package provides a variety of automated tools that can always be overridden by the user. The central part of the package is its selection algorithm that finds the most robust map with the smallest number...

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Veröffentlicht in:Bioinformatics 1995-04, Vol.11 (2), p.173-179
Hauptverfasser: Veklerov, Eugene, Martin, Christopher H., Theil, Edward H.
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creator Veklerov, Eugene
Martin, Christopher H.
Theil, Edward H.
description TRAMP is a software package for generating transposon maps that are used for DNA sequencing. The package provides a variety of automated tools that can always be overridden by the user. The central part of the package is its selection algorithm that finds the most robust map with the smallest number of inserts. TRAMP has been in daily use by the sequencing team at LBL since it was introduced in the Spring of 1994. It is applicable to any sequencing project utilizing the directed strategy.
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1460-2059
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source Oxford University Press Journals Digital Archive legacy; MEDLINE; Access via Oxford University Press (Open Access Collection); Alma/SFX Local Collection
subjects Algorithms
Biological and medical sciences
Chromosome Mapping
DNA Transposable Elements
Fundamental and applied biological sciences. Psychology
General aspects
Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects)
Sequence Analysis, DNA
Software
title TRAMP: a software package for generating transposon maps
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