TRAMP: a software package for generating transposon maps

TRAMP is a software package for generating transposon maps that are used for DNA sequencing. The package provides a variety of automated tools that can always be overridden by the user. The central part of the package is its selection algorithm that finds the most robust map with the smallest number...

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Veröffentlicht in:	Bioinformatics 1995-04, Vol.11 (2), p.173-179
Hauptverfasser:	Veklerov, Eugene, Martin, Christopher H., Theil, Edward H.
Format:	Artikel
Sprache:	eng
Schlagworte:	Algorithms Biological and medical sciences Chromosome Mapping DNA Transposable Elements Fundamental and applied biological sciences. Psychology General aspects Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) Sequence Analysis, DNA Software
Online-Zugang:	Volltext
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Beschreibung
Zusammenfassung:	TRAMP is a software package for generating transposon maps that are used for DNA sequencing. The package provides a variety of automated tools that can always be overridden by the user. The central part of the package is its selection algorithm that finds the most robust map with the smallest number of inserts. TRAMP has been in daily use by the sequencing team at LBL since it was introduced in the Spring of 1994. It is applicable to any sequencing project utilizing the directed strategy.
ISSN:	1367-4803 0266-7061 1460-2059
DOI:	10.1093/bioinformatics/11.2.173