Nucleotides. Part LXXIII: Oligoribonucleotide Synthesis with the (2‐Cyano‐1‐phenylethoxy)carbonyl (2c1peoc) Group for the 5′‐Hydroxy Protection

The (2‐cyano‐1‐phenylethoxy)carbonyl (2c1peoc) group was developed as a new base‐labile protecting group for the 5′‐OH function in solid‐phase synthesis of oligoribonucleotides via the phosphoramidite approach. The half‐lives of its β ‐elimination process by 0.1 M DBU (1,8‐diazabicyclo[5.4.0]undec‐7...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Helvetica chimica acta 2003-07, Vol.86 (7), p.2546-2565
Hauptverfasser: Münch, Ursula, Pfleiderer, Wolfgang
Format: Artikel
Sprache:eng
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
Beschreibung
Zusammenfassung:The (2‐cyano‐1‐phenylethoxy)carbonyl (2c1peoc) group was developed as a new base‐labile protecting group for the 5′‐OH function in solid‐phase synthesis of oligoribonucleotides via the phosphoramidite approach. The half‐lives of its β ‐elimination process by 0.1 M DBU (1,8‐diazabicyclo[5.4.0]undec‐7‐ene) were determined to be 7–14 s by HPLC investigations. The 2′‐OH function was protected with the acid‐labile tetrahydro‐4‐methoxy‐2 H ‐pyran‐4‐yl (thmp) group, while the 2‐(4‐nitrophenyl)ethyl (npe) and 2‐(4‐nitrophenyl)ethoxycarbonyl (npeoc) groups were used for the protection of the base and phosphate moieties. The syntheses of the monomeric building blocks, both phosphoramidites and nucleoside‐functionalized supports, as well as the build‐up of oligoribonucleotides by means of this approach are described.
ISSN:0018-019X
1522-2675
DOI:10.1002/hlca.200390206