NMR spectroscopy based metabonomic studies on the comparative biochemistry of the kidney and urine of the bank vole ( Clethrionomys glareolus), wood mouse ( Apodemus sylvaticus), white toothed shrew ( Crocidura suaveolens) and the laboratory rat
The metabolic profiles of three wild mammals that vary in their trophic strategies, the herbivorous bank vole ( Clethrionomys glareolus), the granivorous wood mouse ( Apodemus sylvaticus), and the insectivorous white-toothed shrew ( Crocidura suaveolens), were compared with that of a widely used str...
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Veröffentlicht in: | Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology 2000-11, Vol.127 (3), p.357-367 |
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creator | Griffin, J.L Walker, L.A Garrod, S Holmes, E Shore, R.F Nicholson, J.K |
description | The metabolic profiles of three wild mammals that vary in their trophic strategies, the herbivorous bank vole (
Clethrionomys glareolus), the granivorous wood mouse (
Apodemus sylvaticus), and the insectivorous white-toothed shrew (
Crocidura suaveolens), were compared with that of a widely used strain of laboratory rat (Sprague Dawley). In conjunction with NMR spectroscopic investigations into the urine and blood plasma composition for these mammals, high resolution magic angle spinning (HRMAS)
1H-nuclear magnetic resonance (NMR) spectroscopy was applied to investigate the composition of intact kidney samples. Adaptation to natural diet affects both renal metabolism and urinary profiles, and while these techniques have been used to study the metabolism of the laboratory rat little is known about wild small mammals. The species were readily separated by their urinary profiles using either crude metabolite ratios or statistical pattern recognition. Bank vole urine contained higher concentrations of aromatic amino acids compared with the other small mammals, while the laboratory rats produced relatively more hippurate. HRMAS
1H-NMR demonstrated striking differences in both lipid concentration and composition between the wild mammals and Sprague Dawley rats. Bank voles contained high concentrations of the aromatic amino acids phenylalanine, tyrosine and tryptophan in all tissue and biofluids studied. This study demonstrates the analytical power of combined NMR techniques for the study of inter-species metabolism and further demonstrates that metabolic data acquired on laboratory animals cannot be extended to wild species. |
doi_str_mv | 10.1016/S0305-0491(00)00276-5 |
format | Article |
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Clethrionomys glareolus), the granivorous wood mouse (
Apodemus sylvaticus), and the insectivorous white-toothed shrew (
Crocidura suaveolens), were compared with that of a widely used strain of laboratory rat (Sprague Dawley). In conjunction with NMR spectroscopic investigations into the urine and blood plasma composition for these mammals, high resolution magic angle spinning (HRMAS)
1H-nuclear magnetic resonance (NMR) spectroscopy was applied to investigate the composition of intact kidney samples. Adaptation to natural diet affects both renal metabolism and urinary profiles, and while these techniques have been used to study the metabolism of the laboratory rat little is known about wild small mammals. The species were readily separated by their urinary profiles using either crude metabolite ratios or statistical pattern recognition. Bank vole urine contained higher concentrations of aromatic amino acids compared with the other small mammals, while the laboratory rats produced relatively more hippurate. HRMAS
1H-NMR demonstrated striking differences in both lipid concentration and composition between the wild mammals and Sprague Dawley rats. Bank voles contained high concentrations of the aromatic amino acids phenylalanine, tyrosine and tryptophan in all tissue and biofluids studied. This study demonstrates the analytical power of combined NMR techniques for the study of inter-species metabolism and further demonstrates that metabolic data acquired on laboratory animals cannot be extended to wild species.</description><identifier>ISSN: 1096-4959</identifier><identifier>EISSN: 1879-1107</identifier><identifier>DOI: 10.1016/S0305-0491(00)00276-5</identifier><identifier>PMID: 11126766</identifier><language>eng</language><publisher>England: Elsevier Inc</publisher><subject>1H-NMR ; Animals ; Arvicolinae - metabolism ; Arvicolinae - urine ; Bank vole ( Clethrionomys glareolus) ; Clethrionomys glareolus ; Kidney - metabolism ; Magic angle spinning NMR ; Magnetic Resonance Spectroscopy - methods ; Metabonomics ; Muridae - metabolism ; Muridae - urine ; Rats ; Rats, Sprague-Dawley ; Shrews - metabolism ; Shrews - urine ; Urinalysis ; White toothed shrew ( Crocidura suaveolens) ; Wood mouse ( Apodemus sylvaticus)</subject><ispartof>Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology, 2000-11, Vol.127 (3), p.357-367</ispartof><rights>2000 Elsevier Science Inc.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c510t-e1b08fa5bf0ab084ddfcd2e03fca5e94c6866427f14b74cff4a9439ae2830ad3</citedby><cites>FETCH-LOGICAL-c510t-e1b08fa5bf0ab084ddfcd2e03fca5e94c6866427f14b74cff4a9439ae2830ad3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/S0305-0491(00)00276-5$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11126766$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Griffin, J.L</creatorcontrib><creatorcontrib>Walker, L.A</creatorcontrib><creatorcontrib>Garrod, S</creatorcontrib><creatorcontrib>Holmes, E</creatorcontrib><creatorcontrib>Shore, R.F</creatorcontrib><creatorcontrib>Nicholson, J.K</creatorcontrib><title>NMR spectroscopy based metabonomic studies on the comparative biochemistry of the kidney and urine of the bank vole ( Clethrionomys glareolus), wood mouse ( Apodemus sylvaticus), white toothed shrew ( Crocidura suaveolens) and the laboratory rat</title><title>Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology</title><addtitle>Comp Biochem Physiol B Biochem Mol Biol</addtitle><description>The metabolic profiles of three wild mammals that vary in their trophic strategies, the herbivorous bank vole (
Clethrionomys glareolus), the granivorous wood mouse (
Apodemus sylvaticus), and the insectivorous white-toothed shrew (
Crocidura suaveolens), were compared with that of a widely used strain of laboratory rat (Sprague Dawley). In conjunction with NMR spectroscopic investigations into the urine and blood plasma composition for these mammals, high resolution magic angle spinning (HRMAS)
1H-nuclear magnetic resonance (NMR) spectroscopy was applied to investigate the composition of intact kidney samples. Adaptation to natural diet affects both renal metabolism and urinary profiles, and while these techniques have been used to study the metabolism of the laboratory rat little is known about wild small mammals. The species were readily separated by their urinary profiles using either crude metabolite ratios or statistical pattern recognition. Bank vole urine contained higher concentrations of aromatic amino acids compared with the other small mammals, while the laboratory rats produced relatively more hippurate. HRMAS
1H-NMR demonstrated striking differences in both lipid concentration and composition between the wild mammals and Sprague Dawley rats. Bank voles contained high concentrations of the aromatic amino acids phenylalanine, tyrosine and tryptophan in all tissue and biofluids studied. This study demonstrates the analytical power of combined NMR techniques for the study of inter-species metabolism and further demonstrates that metabolic data acquired on laboratory animals cannot be extended to wild species.</description><subject>1H-NMR</subject><subject>Animals</subject><subject>Arvicolinae - metabolism</subject><subject>Arvicolinae - urine</subject><subject>Bank vole ( Clethrionomys glareolus)</subject><subject>Clethrionomys glareolus</subject><subject>Kidney - metabolism</subject><subject>Magic angle spinning NMR</subject><subject>Magnetic Resonance Spectroscopy - methods</subject><subject>Metabonomics</subject><subject>Muridae - metabolism</subject><subject>Muridae - urine</subject><subject>Rats</subject><subject>Rats, Sprague-Dawley</subject><subject>Shrews - metabolism</subject><subject>Shrews - urine</subject><subject>Urinalysis</subject><subject>White toothed shrew ( Crocidura suaveolens)</subject><subject>Wood mouse ( Apodemus sylvaticus)</subject><issn>1096-4959</issn><issn>1879-1107</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2000</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFUstu1TAQjRCIlsIngLxCvRKBcRLnsULVFS-pgATdW449JqZJnNpOqnw4e5x7L2LZ1YzsM-fM4yTJSwpvKdDy3U_IgaVQNPQSYAeQVWXKHiXntK6alFKoHsccmjItGtacJc-8_w2Q1zSnT5MzSmlWVmV5nvz59vUH8RPK4KyXdlpJKzwqMmAQrR3tYCTxYVYGPbEjCR0SaYdJOBHMgqQ1VnY4GB_cSqw-_N8aNeJKxKjI7MyI_95bMd6SxfZILsm-x9A5swmsnvzqhUPbz373htxbG9Xt7DfY1WQVDrMnfu2XqCiPkM4EJMHayKqI7xzeb5TOSqNmJ4ifxRLpcPS7QxebeB-niT3b2GYMz5MnWvQeX5ziRXLz8cPN_nN6_f3Tl_3VdSoZhZAibaHWgrUaRMwKpbRUGUKupWDYFLKsy7LIKk2Ltiqk1oVoirwRmNU5CJVfJK-PtJOzdzP6wOOmJPa9GDFOyKuMAcviWR4C0hqiVNZEIDsCZTyXd6j55Mwg3Mop8M0X_OALvvmCA_CDLziLda9OAnM7oPpfdTJCBLw_AjCuYzHouJcGR4nKuGgOrqx5QOIvenTOHw</recordid><startdate>20001101</startdate><enddate>20001101</enddate><creator>Griffin, J.L</creator><creator>Walker, L.A</creator><creator>Garrod, S</creator><creator>Holmes, E</creator><creator>Shore, R.F</creator><creator>Nicholson, J.K</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope><scope>7X8</scope></search><sort><creationdate>20001101</creationdate><title>NMR spectroscopy based metabonomic studies on the comparative biochemistry of the kidney and urine of the bank vole ( Clethrionomys glareolus), wood mouse ( Apodemus sylvaticus), white toothed shrew ( Crocidura suaveolens) and the laboratory rat</title><author>Griffin, J.L ; Walker, L.A ; Garrod, S ; Holmes, E ; Shore, R.F ; Nicholson, J.K</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c510t-e1b08fa5bf0ab084ddfcd2e03fca5e94c6866427f14b74cff4a9439ae2830ad3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2000</creationdate><topic>1H-NMR</topic><topic>Animals</topic><topic>Arvicolinae - metabolism</topic><topic>Arvicolinae - urine</topic><topic>Bank vole ( Clethrionomys glareolus)</topic><topic>Clethrionomys glareolus</topic><topic>Kidney - metabolism</topic><topic>Magic angle spinning NMR</topic><topic>Magnetic Resonance Spectroscopy - methods</topic><topic>Metabonomics</topic><topic>Muridae - metabolism</topic><topic>Muridae - urine</topic><topic>Rats</topic><topic>Rats, Sprague-Dawley</topic><topic>Shrews - metabolism</topic><topic>Shrews - urine</topic><topic>Urinalysis</topic><topic>White toothed shrew ( Crocidura suaveolens)</topic><topic>Wood mouse ( Apodemus sylvaticus)</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Griffin, J.L</creatorcontrib><creatorcontrib>Walker, L.A</creatorcontrib><creatorcontrib>Garrod, S</creatorcontrib><creatorcontrib>Holmes, E</creatorcontrib><creatorcontrib>Shore, R.F</creatorcontrib><creatorcontrib>Nicholson, J.K</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>MEDLINE - Academic</collection><jtitle>Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Griffin, J.L</au><au>Walker, L.A</au><au>Garrod, S</au><au>Holmes, E</au><au>Shore, R.F</au><au>Nicholson, J.K</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>NMR spectroscopy based metabonomic studies on the comparative biochemistry of the kidney and urine of the bank vole ( Clethrionomys glareolus), wood mouse ( Apodemus sylvaticus), white toothed shrew ( Crocidura suaveolens) and the laboratory rat</atitle><jtitle>Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology</jtitle><addtitle>Comp Biochem Physiol B Biochem Mol Biol</addtitle><date>2000-11-01</date><risdate>2000</risdate><volume>127</volume><issue>3</issue><spage>357</spage><epage>367</epage><pages>357-367</pages><issn>1096-4959</issn><eissn>1879-1107</eissn><abstract>The metabolic profiles of three wild mammals that vary in their trophic strategies, the herbivorous bank vole (
Clethrionomys glareolus), the granivorous wood mouse (
Apodemus sylvaticus), and the insectivorous white-toothed shrew (
Crocidura suaveolens), were compared with that of a widely used strain of laboratory rat (Sprague Dawley). In conjunction with NMR spectroscopic investigations into the urine and blood plasma composition for these mammals, high resolution magic angle spinning (HRMAS)
1H-nuclear magnetic resonance (NMR) spectroscopy was applied to investigate the composition of intact kidney samples. Adaptation to natural diet affects both renal metabolism and urinary profiles, and while these techniques have been used to study the metabolism of the laboratory rat little is known about wild small mammals. The species were readily separated by their urinary profiles using either crude metabolite ratios or statistical pattern recognition. Bank vole urine contained higher concentrations of aromatic amino acids compared with the other small mammals, while the laboratory rats produced relatively more hippurate. HRMAS
1H-NMR demonstrated striking differences in both lipid concentration and composition between the wild mammals and Sprague Dawley rats. Bank voles contained high concentrations of the aromatic amino acids phenylalanine, tyrosine and tryptophan in all tissue and biofluids studied. This study demonstrates the analytical power of combined NMR techniques for the study of inter-species metabolism and further demonstrates that metabolic data acquired on laboratory animals cannot be extended to wild species.</abstract><cop>England</cop><pub>Elsevier Inc</pub><pmid>11126766</pmid><doi>10.1016/S0305-0491(00)00276-5</doi><tpages>11</tpages></addata></record> |
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ispartof | Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology, 2000-11, Vol.127 (3), p.357-367 |
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language | eng |
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source | MEDLINE; Elsevier ScienceDirect Journals Complete |
subjects | 1H-NMR Animals Arvicolinae - metabolism Arvicolinae - urine Bank vole ( Clethrionomys glareolus) Clethrionomys glareolus Kidney - metabolism Magic angle spinning NMR Magnetic Resonance Spectroscopy - methods Metabonomics Muridae - metabolism Muridae - urine Rats Rats, Sprague-Dawley Shrews - metabolism Shrews - urine Urinalysis White toothed shrew ( Crocidura suaveolens) Wood mouse ( Apodemus sylvaticus) |
title | NMR spectroscopy based metabonomic studies on the comparative biochemistry of the kidney and urine of the bank vole ( Clethrionomys glareolus), wood mouse ( Apodemus sylvaticus), white toothed shrew ( Crocidura suaveolens) and the laboratory rat |
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