How Reliable Are Current Docking Approaches for Structure-Based Drug Design? Lessons from Aldose Reductase

Two related inhibitors were flexibly docked into different conformers of aldose reductase. Although the overall binding topologies were roughly matched, significant deviations are observed in the subsequently determined crystal structures. Flexible redocking into the crystallographically observed pr...

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Veröffentlicht in:Angewandte Chemie International Edition 2007-01, Vol.46 (19), p.3575-3578
Hauptverfasser: Zentgraf, Matthias, Steuber, Holger, Koch, Cornelia, La Motta, Concettina, Sartini, Stefania, Sotriffer, Christoph A., Klebe, Gerhard
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Sprache:eng
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Zusammenfassung:Two related inhibitors were flexibly docked into different conformers of aldose reductase. Although the overall binding topologies were roughly matched, significant deviations are observed in the subsequently determined crystal structures. Flexible redocking into the crystallographically observed protein conformers achieves, however, perfect binding‐position predictions.
ISSN:1433-7851
1521-3773
DOI:10.1002/anie.200603625