WWW access to the SYSTERS protein sequence cluster set

We present a Web server where the SYSTERS cluster set of the non-redundant protein database consisting of sequences from SWISS-PROT and PIR is being made available for querying and browsing. The cluster set can be searched with a new sequence using the SSMAL search tool. Additionally, a multiple ali...

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Veröffentlicht in:	Bioinformatics (Oxford, England) England), 1999-03, Vol.15 (3), p.262-263
Hauptverfasser:	KRAUSE, A, NICODEME, P, BORNBERG-BAUER, E, REHMSMEIER, M, VINGRON, M
Format:	Artikel
Sprache:	eng
Schlagworte:	Algorithms Amino Acid Sequence Animals Biological and medical sciences Databases, Factual Fundamental and applied biological sciences. Psychology General aspects Humans Internet Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) Molecular Sequence Data Proteins - genetics Sequence Alignment Sequence Homology, Amino Acid
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Beschreibung
Zusammenfassung:	We present a Web server where the SYSTERS cluster set of the non-redundant protein database consisting of sequences from SWISS-PROT and PIR is being made available for querying and browsing. The cluster set can be searched with a new sequence using the SSMAL search tool. Additionally, a multiple alignment is generated for each cluster and annotated with domain information from the Pfam protein family database. The server address is http://www.dkfz-heidelberg.de/tbi/services/cluster/ systersform
ISSN:	1367-4803 1367-4811
DOI:	10.1093/bioinformatics/15.3.262