Bayesian hierarchical model for large-scale covariance matrix estimation

Many bioinformatics problems implicitly depend on estimating large-scale covariance matrix. The traditional approaches tend to give rise to high variance and low accuracy due to "overfitting." We cast the large-scale covariance matrix estimation problem into the Bayesian hierarchical model...

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Veröffentlicht in:Journal of computational biology 2007-12, Vol.14 (10), p.1311-1326
Hauptverfasser: Zhu, Dongxiao, Hero, 3rd, Alfred O
Format: Artikel
Sprache:eng
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Zusammenfassung:Many bioinformatics problems implicitly depend on estimating large-scale covariance matrix. The traditional approaches tend to give rise to high variance and low accuracy due to "overfitting." We cast the large-scale covariance matrix estimation problem into the Bayesian hierarchical model framework, and introduce dependency between covariance parameters. We demonstrate the advantages of our approaches over the traditional approaches using simulations and OMICS data analysis.
ISSN:1066-5277
1557-8666
DOI:10.1089/cmb.2006.0151