QSCOP—SCOP quantified by structural relationships

QSCOP—SCOP quantified by structural relationships

The database SCOP (Structural Classification Of Proteins) has become a major resource in bioinformatics and protein science. A particular strength of SCOP is the flexibility of its rules enabling the preservation of the many details spotted by experts in the classification process. Here we endow cla...

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Veröffentlicht in:Bioinformatics 2007-02, Vol.23 (4), p.513-514
Hauptverfasser: Suhrer, Stefan J., Wiederstein, Markus, Sippl, Manfred J.
Format: Artikel
Sprache:eng
Schlagworte:
Biological and medical sciences
Computer Simulation
Databases, Protein
Fundamental and applied biological sciences. Psychology
General aspects
Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects)
Models, Chemical
Models, Molecular
Protein Conformation
Proteins - chemistry
Proteins - ultrastructure
Sequence Alignment - methods
Sequence Analysis, Protein - methods
Structure-Activity Relationship
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Beschreibung
Zusammenfassung:The database SCOP (Structural Classification Of Proteins) has become a major resource in bioinformatics and protein science. A particular strength of SCOP is the flexibility of its rules enabling the preservation of the many details spotted by experts in the classification process. Here we endow classic SCOP Families with quantified structural information and comment on the structural diversity found in the SCOP hierarchy. Availability: Quantified SCOP (QSCOP) is available as a public WEB service. Contact:sippl@came.sbg.ac.at
ISSN:1367-4803
1460-2059
1367-4811
DOI:10.1093/bioinformatics/btl594