G8: a novel domain associated with polycystic kidney disease and non-syndromic hearing loss

We report a novel protein domain—G8—which contains five repeated β-strand pairs and is present in some disease-related proteins such as PKHD1, KIAA1199, TMEM2 as well as other uncharacterized proteins. Most G8-containing proteins are predicted to be membrane-integral or secreted. The G8 domain may b...

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Veröffentlicht in:Bioinformatics 2006-09, Vol.22 (18), p.2189-2191
Hauptverfasser: He, Quan-yuan, Liu, Xiang-hua, Li, Qiang, Studholme, David J., Li, Xuan-wen, Liang, Song-ping
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Sprache:eng
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Zusammenfassung:We report a novel protein domain—G8—which contains five repeated β-strand pairs and is present in some disease-related proteins such as PKHD1, KIAA1199, TMEM2 as well as other uncharacterized proteins. Most G8-containing proteins are predicted to be membrane-integral or secreted. The G8 domain may be involved in extracellular ligand binding and catalysis. It has been reported that mis-sense mutations in the two G8 domains of human PKHD1 protein resulted in a less stable protein and are associated with autosomal-recessive polycystic kidney disease, indicating the importance of the domain structure. G8 is also present in the N-terminus of some non-syndromic hearing loss disease-related proteins such as KIAA1109 and TMEM2. Discovery of G8 domain will be important for the research of the structure/function of related proteins and beneficial for the development of novel therapeutics. Contact:liangsp@hunnu.edu.cn
ISSN:1367-4803
1460-2059
1367-4811
DOI:10.1093/bioinformatics/btl123