Adhesion-induced DNA naturation

DNA adsorption and naturation is modeled via two interacting flexible homopolymers coupled to a solid surface. DNA denatures if the entropy gain for unbinding the two strands overcomes the loss of binding energy. When adsorbed to a surface, the entropy gain is smaller than in the bulk, leading to a...

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Veröffentlicht in:Physical review letters 2006-03, Vol.96 (9), p.098302-098302, Article 098302
Hauptverfasser: Allahverdyan, A E, Gevorkian, Zh S, Hu, Chin-Kun, Nieuwenhuizen, Th M
Format: Artikel
Sprache:eng
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Zusammenfassung:DNA adsorption and naturation is modeled via two interacting flexible homopolymers coupled to a solid surface. DNA denatures if the entropy gain for unbinding the two strands overcomes the loss of binding energy. When adsorbed to a surface, the entropy gain is smaller than in the bulk, leading to a stronger binding and, upon neglecting self-avoidance, absence of a denatured phase. Now consider conditions where the binding potentials are too weak for naturation, and the surface potential too weak to adsorb single strands. In a variational approach it is shown that their combined action may lead to a naturated adsorbed phase. Conditions for the absence of naturation and adsorption are derived too. The phase diagram is constructed qualitatively.
ISSN:0031-9007
1079-7114
DOI:10.1103/PhysRevLett.96.098302