Bacillus solisalsi sp. nov., a halotolerant, alkaliphilic bacterium isolated from soil around a salt lake
1 Biotoxin Units of Key Laboratory of Animal Models and Human Disease Mechanisms, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, Yunnan, PR China 2 Graduate School of the Chinese Academy of Sciences, Beijing 100009, PR China 3 Key Laboratory of Microbiological Engineering...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2009-06, Vol.59 (6), p.1460-1464 |
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| creator | Liu, Huan Zhou, Yu Liu, Rui Zhang, Ke-Yun Lai, Ren |
| description | 1 Biotoxin Units of Key Laboratory of Animal Models and Human Disease Mechanisms, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, Yunnan, PR China
2 Graduate School of the Chinese Academy of Sciences, Beijing 100009, PR China
3 Key Laboratory of Microbiological Engineering of Agricultural Environment, Ministry of Agriculture, Life Sciences College of Nanjing Agricultural University, Nanjing, Jiangsu, 210095, PR China
4 Institute of Quality and Standard for Agricultural Products, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang 310021, PR China
Correspondence Ren Lai rlai72{at}njau.edu.cn
A novel Gram-positive, motile, rod-shaped bacterium isolated from a saline soil in China was characterized by a polyphasic taxonomic approach. The strain, designated YC1 T , was halotolerant [tolerating up to 15 % (w/v) NaCl] and alkaliphilic (growing at a broad pH range of 5–13). 16S rRNA gene sequence analysis revealed that the isolate belonged to the genus Bacillus , showing highest similarity to Bacillus macauensis JCM 13285 T (98.0 %). However, DNA–DNA hybridization indicated low levels of genomic relatedness with B. macauensis JCM 13285 T (8.5 %). The major isoprenoid quinone was MK-7 and the cellular fatty acid profile consisted of significant amounts of iso-C 15 : 0 (38.6 %) and anteiso-C 15 : 0 (35.9 %). The predominant polar lipids were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. The G+C content of the genomic DNA was 41.8 mol%. On the basis of the polyphasic evidence from this study, strain YC1 T (=KCTC 13181 T =CGMCC 1.6854 T ) should be classified as the type strain of a novel species of the genus Bacillus , for which the name Bacillus solisalsi sp. nov. is proposed.
Abbreviations: AL, aminolipid; APL, aminophospholipid; DPG, diphosphatidylglycerol; PE, phosphatidylethanolamine; PG, phosphatidylglycerol
These authors contributed equally to this work.
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain YC1 T is EU046268 .
The TLC analysis of the polar lipid composition of the novel strain and B. macauensis and a transmission electron micrograph of cells of strain YC1 T are available as supplementary figures with the online version of this paper. |
| doi_str_mv | 10.1099/ijs.0.000653-0 |
| format | Article |
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2 Graduate School of the Chinese Academy of Sciences, Beijing 100009, PR China
3 Key Laboratory of Microbiological Engineering of Agricultural Environment, Ministry of Agriculture, Life Sciences College of Nanjing Agricultural University, Nanjing, Jiangsu, 210095, PR China
4 Institute of Quality and Standard for Agricultural Products, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang 310021, PR China
Correspondence Ren Lai rlai72{at}njau.edu.cn
A novel Gram-positive, motile, rod-shaped bacterium isolated from a saline soil in China was characterized by a polyphasic taxonomic approach. The strain, designated YC1 T , was halotolerant [tolerating up to 15 % (w/v) NaCl] and alkaliphilic (growing at a broad pH range of 5–13). 16S rRNA gene sequence analysis revealed that the isolate belonged to the genus Bacillus , showing highest similarity to Bacillus macauensis JCM 13285 T (98.0 %). However, DNA–DNA hybridization indicated low levels of genomic relatedness with B. macauensis JCM 13285 T (8.5 %). The major isoprenoid quinone was MK-7 and the cellular fatty acid profile consisted of significant amounts of iso-C 15 : 0 (38.6 %) and anteiso-C 15 : 0 (35.9 %). The predominant polar lipids were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. The G+C content of the genomic DNA was 41.8 mol%. On the basis of the polyphasic evidence from this study, strain YC1 T (=KCTC 13181 T =CGMCC 1.6854 T ) should be classified as the type strain of a novel species of the genus Bacillus , for which the name Bacillus solisalsi sp. nov. is proposed.
Abbreviations: AL, aminolipid; APL, aminophospholipid; DPG, diphosphatidylglycerol; PE, phosphatidylethanolamine; PG, phosphatidylglycerol
These authors contributed equally to this work.
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain YC1 T is EU046268 .
The TLC analysis of the polar lipid composition of the novel strain and B. macauensis and a transmission electron micrograph of cells of strain YC1 T are available as supplementary figures with the online version of this paper.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijs.0.000653-0</identifier><identifier>PMID: 19502335</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Bacillus ; Bacillus - classification ; Bacillus - genetics ; Bacillus - isolation & purification ; Bacillus - physiology ; Bacterial Typing Techniques ; Bacteriology ; Base Composition ; Biological and medical sciences ; China ; DNA, Bacterial - analysis ; DNA, Ribosomal - analysis ; Fatty Acids - analysis ; Fresh Water - microbiology ; Fundamental and applied biological sciences. Psychology ; Hydrogen-Ion Concentration ; Lipids - analysis ; Microbiology ; Molecular Sequence Data ; Nucleic Acid Hybridization ; Phenotype ; Phylogeny ; Polymerase Chain Reaction - methods ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Sodium Chloride - metabolism ; Soil Microbiology ; Species Specificity ; Systematics</subject><ispartof>International journal of systematic and evolutionary microbiology, 2009-06, Vol.59 (6), p.1460-1464</ispartof><rights>2009 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c427t-a9f7fb0d65413636d008fb143fae4ddc723aaa4c94dc0a0c606769c91836b9ad3</citedby><cites>FETCH-LOGICAL-c427t-a9f7fb0d65413636d008fb143fae4ddc723aaa4c94dc0a0c606769c91836b9ad3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,3746,3747,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=21650006$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19502335$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Liu, Huan</creatorcontrib><creatorcontrib>Zhou, Yu</creatorcontrib><creatorcontrib>Liu, Rui</creatorcontrib><creatorcontrib>Zhang, Ke-Yun</creatorcontrib><creatorcontrib>Lai, Ren</creatorcontrib><title>Bacillus solisalsi sp. nov., a halotolerant, alkaliphilic bacterium isolated from soil around a salt lake</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>1 Biotoxin Units of Key Laboratory of Animal Models and Human Disease Mechanisms, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, Yunnan, PR China
2 Graduate School of the Chinese Academy of Sciences, Beijing 100009, PR China
3 Key Laboratory of Microbiological Engineering of Agricultural Environment, Ministry of Agriculture, Life Sciences College of Nanjing Agricultural University, Nanjing, Jiangsu, 210095, PR China
4 Institute of Quality and Standard for Agricultural Products, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang 310021, PR China
Correspondence Ren Lai rlai72{at}njau.edu.cn
A novel Gram-positive, motile, rod-shaped bacterium isolated from a saline soil in China was characterized by a polyphasic taxonomic approach. The strain, designated YC1 T , was halotolerant [tolerating up to 15 % (w/v) NaCl] and alkaliphilic (growing at a broad pH range of 5–13). 16S rRNA gene sequence analysis revealed that the isolate belonged to the genus Bacillus , showing highest similarity to Bacillus macauensis JCM 13285 T (98.0 %). However, DNA–DNA hybridization indicated low levels of genomic relatedness with B. macauensis JCM 13285 T (8.5 %). The major isoprenoid quinone was MK-7 and the cellular fatty acid profile consisted of significant amounts of iso-C 15 : 0 (38.6 %) and anteiso-C 15 : 0 (35.9 %). The predominant polar lipids were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. The G+C content of the genomic DNA was 41.8 mol%. On the basis of the polyphasic evidence from this study, strain YC1 T (=KCTC 13181 T =CGMCC 1.6854 T ) should be classified as the type strain of a novel species of the genus Bacillus , for which the name Bacillus solisalsi sp. nov. is proposed.
Abbreviations: AL, aminolipid; APL, aminophospholipid; DPG, diphosphatidylglycerol; PE, phosphatidylethanolamine; PG, phosphatidylglycerol
These authors contributed equally to this work.
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain YC1 T is EU046268 .
The TLC analysis of the polar lipid composition of the novel strain and B. macauensis and a transmission electron micrograph of cells of strain YC1 T are available as supplementary figures with the online version of this paper.</description><subject>Bacillus</subject><subject>Bacillus - classification</subject><subject>Bacillus - genetics</subject><subject>Bacillus - isolation & purification</subject><subject>Bacillus - physiology</subject><subject>Bacterial Typing Techniques</subject><subject>Bacteriology</subject><subject>Base Composition</subject><subject>Biological and medical sciences</subject><subject>China</subject><subject>DNA, Bacterial - analysis</subject><subject>DNA, Ribosomal - analysis</subject><subject>Fatty Acids - analysis</subject><subject>Fresh Water - microbiology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Hydrogen-Ion Concentration</subject><subject>Lipids - analysis</subject><subject>Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Nucleic Acid Hybridization</subject><subject>Phenotype</subject><subject>Phylogeny</subject><subject>Polymerase Chain Reaction - methods</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Sodium Chloride - metabolism</subject><subject>Soil Microbiology</subject><subject>Species Specificity</subject><subject>Systematics</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1v1DAQhi0Eoh9w5Yh8AfVAwjh2nPWxVECRKnGBszVxnO60TrzYCVX_PV7tqhx7sj165hlrXsbeCagFGPOZ7nINNQDoVlbwgp0KpXXVglQvn-6NPmFnOd8BlALAa3YiTKlK2Z4y-oKOQlgzzzFQxpCJ513N5_i3_sSRbzHEJQafcF7KO9xjoN2WAjneo1t8onXiVHpx8QMfU5yKiALHFNd5KIKiXHjAe_-GvRqL3r89nufs97evv66uq5uf339cXd5UTjXdUqEZu7GHQbdKSC31ALAZe6HkiF4Ng-saiYjKGTU4QHAadKeNM2IjdW9wkOfs48G7S_HP6vNiJ8rOh4Czj2u2upPNRoJ5FmwEiHbTqQLWB9ClmHPyo90lmjA9WgF2n4ItKViwhxQslIb3R_PaT374jx_XXoAPRwCzwzCW7TrKT1wjdLuXFe7iwG3pdvtAydtbP09U_tFT3E9tjdV2n6r8B-wcnoY</recordid><startdate>20090601</startdate><enddate>20090601</enddate><creator>Liu, Huan</creator><creator>Zhou, Yu</creator><creator>Liu, Rui</creator><creator>Zhang, Ke-Yun</creator><creator>Lai, Ren</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope><scope>7X8</scope></search><sort><creationdate>20090601</creationdate><title>Bacillus solisalsi sp. nov., a halotolerant, alkaliphilic bacterium isolated from soil around a salt lake</title><author>Liu, Huan ; Zhou, Yu ; Liu, Rui ; Zhang, Ke-Yun ; Lai, Ren</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c427t-a9f7fb0d65413636d008fb143fae4ddc723aaa4c94dc0a0c606769c91836b9ad3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Bacillus</topic><topic>Bacillus - classification</topic><topic>Bacillus - genetics</topic><topic>Bacillus - isolation & purification</topic><topic>Bacillus - physiology</topic><topic>Bacterial Typing Techniques</topic><topic>Bacteriology</topic><topic>Base Composition</topic><topic>Biological and medical sciences</topic><topic>China</topic><topic>DNA, Bacterial - analysis</topic><topic>DNA, Ribosomal - analysis</topic><topic>Fatty Acids - analysis</topic><topic>Fresh Water - microbiology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Hydrogen-Ion Concentration</topic><topic>Lipids - analysis</topic><topic>Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Nucleic Acid Hybridization</topic><topic>Phenotype</topic><topic>Phylogeny</topic><topic>Polymerase Chain Reaction - methods</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Sodium Chloride - metabolism</topic><topic>Soil Microbiology</topic><topic>Species Specificity</topic><topic>Systematics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Liu, Huan</creatorcontrib><creatorcontrib>Zhou, Yu</creatorcontrib><creatorcontrib>Liu, Rui</creatorcontrib><creatorcontrib>Zhang, Ke-Yun</creatorcontrib><creatorcontrib>Lai, Ren</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Liu, Huan</au><au>Zhou, Yu</au><au>Liu, Rui</au><au>Zhang, Ke-Yun</au><au>Lai, Ren</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Bacillus solisalsi sp. nov., a halotolerant, alkaliphilic bacterium isolated from soil around a salt lake</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2009-06-01</date><risdate>2009</risdate><volume>59</volume><issue>6</issue><spage>1460</spage><epage>1464</epage><pages>1460-1464</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>1 Biotoxin Units of Key Laboratory of Animal Models and Human Disease Mechanisms, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, Yunnan, PR China
2 Graduate School of the Chinese Academy of Sciences, Beijing 100009, PR China
3 Key Laboratory of Microbiological Engineering of Agricultural Environment, Ministry of Agriculture, Life Sciences College of Nanjing Agricultural University, Nanjing, Jiangsu, 210095, PR China
4 Institute of Quality and Standard for Agricultural Products, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang 310021, PR China
Correspondence Ren Lai rlai72{at}njau.edu.cn
A novel Gram-positive, motile, rod-shaped bacterium isolated from a saline soil in China was characterized by a polyphasic taxonomic approach. The strain, designated YC1 T , was halotolerant [tolerating up to 15 % (w/v) NaCl] and alkaliphilic (growing at a broad pH range of 5–13). 16S rRNA gene sequence analysis revealed that the isolate belonged to the genus Bacillus , showing highest similarity to Bacillus macauensis JCM 13285 T (98.0 %). However, DNA–DNA hybridization indicated low levels of genomic relatedness with B. macauensis JCM 13285 T (8.5 %). The major isoprenoid quinone was MK-7 and the cellular fatty acid profile consisted of significant amounts of iso-C 15 : 0 (38.6 %) and anteiso-C 15 : 0 (35.9 %). The predominant polar lipids were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. The G+C content of the genomic DNA was 41.8 mol%. On the basis of the polyphasic evidence from this study, strain YC1 T (=KCTC 13181 T =CGMCC 1.6854 T ) should be classified as the type strain of a novel species of the genus Bacillus , for which the name Bacillus solisalsi sp. nov. is proposed.
Abbreviations: AL, aminolipid; APL, aminophospholipid; DPG, diphosphatidylglycerol; PE, phosphatidylethanolamine; PG, phosphatidylglycerol
These authors contributed equally to this work.
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain YC1 T is EU046268 .
The TLC analysis of the polar lipid composition of the novel strain and B. macauensis and a transmission electron micrograph of cells of strain YC1 T are available as supplementary figures with the online version of this paper.</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>19502335</pmid><doi>10.1099/ijs.0.000653-0</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Bacillus Bacillus - classification Bacillus - genetics Bacillus - isolation & purification Bacillus - physiology Bacterial Typing Techniques Bacteriology Base Composition Biological and medical sciences China DNA, Bacterial - analysis DNA, Ribosomal - analysis Fatty Acids - analysis Fresh Water - microbiology Fundamental and applied biological sciences. Psychology Hydrogen-Ion Concentration Lipids - analysis Microbiology Molecular Sequence Data Nucleic Acid Hybridization Phenotype Phylogeny Polymerase Chain Reaction - methods RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Sodium Chloride - metabolism Soil Microbiology Species Specificity Systematics |
| title | Bacillus solisalsi sp. nov., a halotolerant, alkaliphilic bacterium isolated from soil around a salt lake |
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